Analysis of interatomic Contacts of Structural Units in PDB entry:
2WO0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WO0 entry

There are 4 chains in PDB entry 2WO0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 7	ASN 465
A	ASP 467	LYS 725
B	HIS 6	ASN 465
B	ASP 467	ASP 726

There are 31 helices in PDB entry 2WO0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	10	18	Right-handed alpha
Helix 2	2	A	73	80	Right-handed alpha
Helix 3	3	A	100	114	Right-handed alpha
Helix 4	4	A	132	143	Right-handed alpha
Helix 5	5	A	188	201	Right-handed alpha
Helix 6	6	A	202	212	Right-handed alpha
Helix 7	7	A	216	218	Right-handed 310
Helix 8	8	A	255	259	Right-handed 310
Helix 9	9	A	382	388	Right-handed alpha
Helix 10	10	A	504	509	Right-handed alpha
Helix 11	11	A	572	577	Right-handed alpha
Helix 12	12	A	625	631	Right-handed alpha
Helix 13	13	A	632	636	Right-handed 310
Helix 14	14	A	663	669	Right-handed alpha
Helix 15	15	A	692	696	Right-handed 310
Helix 16	16	B	10	18	Right-handed alpha
Helix 17	17	B	73	79	Right-handed alpha
Helix 18	18	B	80	82	Right-handed 310
Helix 19	19	B	100	113	Right-handed alpha
Helix 20	20	B	132	143	Right-handed alpha
Helix 21	21	B	188	201	Right-handed alpha
Helix 22	22	B	202	211	Right-handed alpha
Helix 23	23	B	216	218	Right-handed 310
Helix 24	24	B	255	259	Right-handed 310
Helix 25	25	B	382	388	Right-handed alpha
Helix 26	26	B	504	509	Right-handed alpha
Helix 27	27	B	572	577	Right-handed alpha
Helix 28	28	B	625	631	Right-handed alpha
Helix 29	29	B	632	636	Right-handed 310
Helix 30	30	B	663	669	Right-handed alpha
Helix 31	31	B	692	696	Right-handed 310

There are 24 sheets in PDB entry 2WO0. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	8	9	first strand
Strand 2	A	68	70	anti-parallel
Strand 3	A	62	63	anti-parallel

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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	24	first strand
Strand 2	A	29	34	anti-parallel
Strand 3	A	37	41	anti-parallel
Strand 4	A	47	50	anti-parallel
Strand 5	A	53	56	anti-parallel

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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	316	319	parallel
Strand 3	A	322	325	anti-parallel
Strand 4	A	328	335	anti-parallel
Strand 5	A	339	349	anti-parallel
Strand 6	A	352	368	anti-parallel
Strand 7	A	380	381	parallel

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There are 9 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	316	319	parallel
Strand 3	A	322	325	anti-parallel
Strand 4	A	328	335	anti-parallel
Strand 5	A	339	349	anti-parallel
Strand 6	A	352	368	anti-parallel
Strand 7	A	524	534	anti-parallel
Strand 8	A	677	689	anti-parallel
Strand 9	A	638	642	anti-parallel

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There are 10 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	316	319	parallel
Strand 3	A	322	325	anti-parallel
Strand 4	A	328	335	anti-parallel
Strand 5	A	339	349	anti-parallel
Strand 6	A	352	368	anti-parallel
Strand 7	A	524	534	anti-parallel
Strand 8	A	677	689	anti-parallel
Strand 9	A	540	552	anti-parallel
Strand 10	A	561	570	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	381	first strand
Strand 2	A	352	368	parallel

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There are 17 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	88	first strand
Strand 2	A	316	319	parallel
Strand 3	A	322	325	anti-parallel
Strand 4	A	328	335	anti-parallel
Strand 5	A	339	349	anti-parallel
Strand 6	A	352	368	anti-parallel
Strand 7	A	524	534	anti-parallel
Strand 8	A	677	689	anti-parallel
Strand 9	A	540	552	anti-parallel
Strand 10	A	585	594	parallel
Strand 11	A	600	611	parallel
Strand 12	A	699	711	anti-parallel
Strand 13	A	480	488	parallel
Strand 14	A	466	475	anti-parallel
Strand 15	A	448	463	parallel
Strand 16	A	420	440	parallel
Strand 17	A	407	414	parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	638	642	first strand
Strand 2	A	677	689	anti-parallel

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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	122	128	first strand
Strand 2	A	151	158	anti-parallel
Strand 3	A	161	168	anti-parallel
Strand 4	A	173	180	anti-parallel

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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	225	first strand
Strand 2	A	242	249	anti-parallel
Strand 3	A	264	269	anti-parallel
Strand 4	A	274	280	anti-parallel

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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	299	first strand
Strand 2	B	722	723	anti-parallel

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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	307	309	first strand
Strand 2	B	307	309	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	492	494	first strand
Strand 2	A	519	522	anti-parallel
Strand 3	A	512	516	anti-parallel

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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	7	9	first strand
Strand 2	B	68	71	anti-parallel
Strand 3	B	62	63	anti-parallel

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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	24	first strand
Strand 2	B	29	34	anti-parallel
Strand 3	B	37	41	anti-parallel
Strand 4	B	47	50	anti-parallel
Strand 5	B	53	56	anti-parallel

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There are 7 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	316	319	parallel
Strand 3	B	322	325	anti-parallel
Strand 4	B	328	335	anti-parallel
Strand 5	B	339	349	anti-parallel
Strand 6	B	352	368	anti-parallel
Strand 7	B	380	381	parallel

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There are 9 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	316	319	parallel
Strand 3	B	322	325	anti-parallel
Strand 4	B	328	335	anti-parallel
Strand 5	B	339	349	anti-parallel
Strand 6	B	352	368	anti-parallel
Strand 7	B	524	534	anti-parallel
Strand 8	B	677	689	anti-parallel
Strand 9	B	638	642	anti-parallel

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There are 10 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	316	319	parallel
Strand 3	B	322	325	anti-parallel
Strand 4	B	328	335	anti-parallel
Strand 5	B	339	349	anti-parallel
Strand 6	B	352	368	anti-parallel
Strand 7	B	524	534	anti-parallel
Strand 8	B	677	689	anti-parallel
Strand 9	B	540	552	anti-parallel
Strand 10	B	561	570	anti-parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	381	first strand
Strand 2	B	352	368	parallel

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There are 17 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	88	first strand
Strand 2	B	316	319	parallel
Strand 3	B	322	325	anti-parallel
Strand 4	B	328	335	anti-parallel
Strand 5	B	339	349	anti-parallel
Strand 6	B	352	368	anti-parallel
Strand 7	B	524	534	anti-parallel
Strand 8	B	677	689	anti-parallel
Strand 9	B	540	552	anti-parallel
Strand 10	B	585	594	parallel
Strand 11	B	600	606	parallel
Strand 12	B	699	711	anti-parallel
Strand 13	B	480	488	parallel
Strand 14	B	466	475	anti-parallel
Strand 15	B	448	463	parallel
Strand 16	B	420	440	parallel
Strand 17	B	407	414	parallel

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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	638	642	first strand
Strand 2	B	677	689	anti-parallel

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There are 4 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	122	129	first strand
Strand 2	B	151	158	anti-parallel
Strand 3	B	161	168	anti-parallel
Strand 4	B	173	180	anti-parallel

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There are 4 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	225	first strand
Strand 2	B	242	249	anti-parallel
Strand 3	B	264	269	anti-parallel
Strand 4	B	274	280	anti-parallel

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There are 3 strands in BK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	492	494	first strand
Strand 2	B	519	522	anti-parallel
Strand 3	B	512	516	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WO0

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WO0