Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WOB entry

There are 3 chains in PDB entry 2WOB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 11ALA 160
C
 ALA 9ALA 161
E
 ASP 8LEU 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2WOB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 46Right-handed 310
Helix 2
2
A
125 129Right-handed 310
Helix 3
3
A
133 137Right-handed 310
Helix 4
4
C
44 46Right-handed 310
Helix 5
5
C
125 129Right-handed 310
Helix 6
6
E
44 46Right-handed 310
Helix 7
7
E
125 129Right-handed 310
Helix 8
8
E
133 137Right-handed 310
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There are 6 sheets in PDB entry 2WOB. Click on sheet of interest to get list of strands forming it: AA, AB, CA, CB, EA, EB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 18first strand
Strand 2
A
29 37anti-parallel
Strand 3
A
114 119anti-parallel
Strand 4
A
63 66anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 82first strand
Strand 2
A
92 98anti-parallel
Strand 3
A
48 54anti-parallel
Strand 4
A
147 150anti-parallel
Strand 5
A
153 156anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
13 18first strand
Strand 2
C
29 37anti-parallel
Strand 3
C
114 119anti-parallel
Strand 4
C
63 66anti-parallel
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There are 5 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
76 82first strand
Strand 2
C
92 98anti-parallel
Strand 3
C
48 54anti-parallel
Strand 4
C
147 150anti-parallel
Strand 5
C
153 156anti-parallel
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There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
13 18first strand
Strand 2
E
29 37anti-parallel
Strand 3
E
114 119anti-parallel
Strand 4
E
63 66anti-parallel
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There are 5 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
76 82first strand
Strand 2
E
92 98anti-parallel
Strand 3
E
48 54anti-parallel
Strand 4
E
147 150anti-parallel
Strand 5
E
153 156anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il