Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WOF entry

There are 4 chains in PDB entry 2WOF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 7ASN 465
A
 ASP 467LYS 725
B
 HIS 6ASN 465
B
 ASP 467ASP 726
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 2WOF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 17Right-handed alpha
Helix 2
2
A
73 80Right-handed alpha
Helix 3
3
A
100 114Right-handed alpha
Helix 4
4
A
132 143Right-handed alpha
Helix 5
5
A
188 201Right-handed alpha
Helix 6
6
A
202 212Right-handed alpha
Helix 7
7
A
216 218Right-handed 310
Helix 8
8
A
255 259Right-handed 310
Helix 9
9
A
504 509Right-handed alpha
Helix 10
10
A
625 631Right-handed alpha
Helix 11
11
A
632 636Right-handed 310
Helix 12
12
A
692 696Right-handed 310
Helix 13
13
B
10 17Right-handed alpha
Helix 14
14
B
73 80Right-handed alpha
Helix 15
15
B
100 113Right-handed alpha
Helix 16
16
B
132 143Right-handed alpha
Helix 17
17
B
188 201Right-handed alpha
Helix 18
18
B
202 212Right-handed alpha
Helix 19
19
B
216 218Right-handed 310
Helix 20
20
B
255 258Right-handed 310
Helix 21
21
B
504 509Right-handed alpha
Helix 22
22
B
572 577Right-handed alpha
Helix 23
23
B
625 631Right-handed alpha
Helix 24
24
B
632 636Right-handed 310
Helix 25
25
B
692 696Right-handed 310
Back to top of page

There are 19 sheets in PDB entry 2WOF. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH, BI,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
62 64anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
29 33anti-parallel
Strand 3
A
38 41anti-parallel
Strand 4
A
47 50anti-parallel
Strand 5
A
54 56anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 129first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
162 168anti-parallel
Strand 4
A
173 179anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 225first strand
Strand 2
A
242 249anti-parallel
Strand 3
A
265 269anti-parallel
Strand 4
A
274 279anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
B
307 309anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 318first strand
Strand 2
A
322 325anti-parallel
Strand 3
A
328 333anti-parallel
Strand 4
A
341 348anti-parallel
Strand 5
A
353 359anti-parallel
Strand 6
A
524 534anti-parallel
Strand 7
A
677 689anti-parallel
Strand 8
A
540 552anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 318first strand
Strand 2
A
322 325anti-parallel
Strand 3
A
328 333anti-parallel
Strand 4
A
341 348anti-parallel
Strand 5
A
353 359anti-parallel
Strand 6
A
524 534anti-parallel
Strand 7
A
677 689anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 368first strand
Strand 2
A
380 381anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 414first strand
Strand 2
A
420 433anti-parallel
Strand 3
A
453 462anti-parallel
Strand 4
A
467 475anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
438 440first strand
Strand 2
A
448 450anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 9first strand
Strand 2
B
68 71anti-parallel
Strand 3
B
62 63anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
20 24first strand
Strand 2
B
29 33anti-parallel
Strand 3
B
38 41anti-parallel
Strand 4
B
47 50anti-parallel
Strand 5
B
54 56anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
122 129first strand
Strand 2
B
151 157anti-parallel
Strand 3
B
162 168anti-parallel
Strand 4
B
173 180anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 225first strand
Strand 2
B
242 249anti-parallel
Strand 3
B
260 269anti-parallel
Strand 4
B
274 279anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 318first strand
Strand 2
B
322 325anti-parallel
Strand 3
B
328 333anti-parallel
Strand 4
B
341 348anti-parallel
Strand 5
B
353 359anti-parallel
Strand 6
B
524 534anti-parallel
Strand 7
B
677 689anti-parallel
Strand 8
B
540 552anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 318first strand
Strand 2
B
322 325anti-parallel
Strand 3
B
328 333anti-parallel
Strand 4
B
341 348anti-parallel
Strand 5
B
353 359anti-parallel
Strand 6
B
524 534anti-parallel
Strand 7
B
677 689anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
367 368first strand
Strand 2
B
380 381anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 414first strand
Strand 2
B
420 433anti-parallel
Strand 3
B
453 462anti-parallel
Strand 4
B
467 475anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
438 440first strand
Strand 2
B
448 450anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il