Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WOG entry

There are 3 chains in PDB entry 2WOG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 17	GLU 364
B	ASN 18	GLU 364
C	LYS 17	PRO 363

There are 45 helices in PDB entry 2WOG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	29	35	Right-handed alpha
Helix 2	2	A	77	85	Right-handed alpha
Helix 3	3	A	85	95	Right-handed alpha
Helix 4	4	A	111	116	Right-handed alpha
Helix 5	5	A	126	130	Right-handed 310
Helix 6	6	A	135	148	Right-handed alpha
Helix 7	7	A	206	208	Right-handed 310
Helix 8	8	A	209	216	Right-handed alpha
Helix 9	9	A	218	228	Right-handed alpha
Helix 10	10	A	230	235	Right-handed alpha
Helix 11	11	A	289	295	Right-handed alpha
Helix 12	12	A	297	305	Right-handed alpha
Helix 13	13	A	310	313	Right-handed 310
Helix 14	14	A	314	321	Right-handed alpha
Helix 15	15	A	322	324	Right-handed 310
Helix 16	16	A	342	357	Right-handed alpha
Helix 17	17	B	29	35	Right-handed alpha
Helix 18	18	B	77	95	Right-handed alpha
Helix 19	19	B	111	116	Right-handed alpha
Helix 20	20	B	135	150	Right-handed alpha
Helix 21	21	B	206	208	Right-handed 310
Helix 22	22	B	209	216	Right-handed alpha
Helix 23	23	B	218	226	Right-handed alpha
Helix 24	24	B	230	235	Right-handed alpha
Helix 25	25	B	289	295	Right-handed alpha
Helix 26	26	B	297	305	Right-handed alpha
Helix 27	27	B	310	313	Right-handed 310
Helix 28	28	B	314	321	Right-handed alpha
Helix 29	29	B	322	324	Right-handed 310
Helix 30	30	B	342	357	Right-handed alpha
Helix 31	31	C	29	35	Right-handed alpha
Helix 32	32	C	77	95	Right-handed alpha
Helix 33	33	C	111	116	Right-handed alpha
Helix 34	34	C	120	124	Right-handed 310
Helix 35	35	C	135	150	Right-handed alpha
Helix 36	36	C	206	208	Right-handed 310
Helix 37	37	C	209	216	Right-handed alpha
Helix 38	38	C	218	228	Right-handed alpha
Helix 39	39	C	230	235	Right-handed alpha
Helix 40	40	C	289	295	Right-handed alpha
Helix 41	41	C	297	304	Right-handed alpha
Helix 42	42	C	310	313	Right-handed 310
Helix 43	43	C	314	321	Right-handed alpha
Helix 44	44	C	322	324	Right-handed 310
Helix 45	45	C	342	357	Right-handed alpha

There are 12 sheets in PDB entry 2WOG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	20	25	parallel
Strand 3	A	329	336	parallel
Strand 4	A	99	104	parallel
Strand 5	A	261	265	parallel
Strand 6	A	236	246	anti-parallel
Strand 7	A	153	164	anti-parallel
Strand 8	A	202	204	anti-parallel

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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	72	first strand
Strand 2	A	20	25	parallel
Strand 3	A	329	336	parallel
Strand 4	A	99	104	parallel
Strand 5	A	261	265	parallel
Strand 6	A	236	246	anti-parallel
Strand 7	A	153	164	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	44	first strand
Strand 2	A	49	53	anti-parallel
Strand 3	A	63	67	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	185	first strand
Strand 2	A	195	197	anti-parallel

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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	72	first strand
Strand 2	B	20	25	parallel
Strand 3	B	329	336	parallel
Strand 4	B	99	104	parallel
Strand 5	B	261	265	parallel
Strand 6	B	236	246	anti-parallel
Strand 7	B	153	164	anti-parallel

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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	72	first strand
Strand 2	B	20	25	parallel
Strand 3	B	329	336	parallel
Strand 4	B	99	104	parallel
Strand 5	B	261	265	parallel
Strand 6	B	236	246	anti-parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	44	first strand
Strand 2	B	49	53	anti-parallel
Strand 3	B	63	67	anti-parallel

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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	185	first strand
Strand 2	B	195	197	anti-parallel

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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	19	25	parallel
Strand 3	C	330	336	parallel
Strand 4	C	99	104	parallel
Strand 5	C	261	265	parallel
Strand 6	C	236	248	anti-parallel
Strand 7	C	153	164	anti-parallel

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There are 6 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	19	25	parallel
Strand 3	C	330	336	parallel
Strand 4	C	99	104	parallel
Strand 5	C	261	265	parallel
Strand 6	C	236	248	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	44	first strand
Strand 2	C	49	53	anti-parallel
Strand 3	C	63	67	anti-parallel

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There are 2 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	187	first strand
Strand 2	C	190	197	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WOG

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOG