Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WOJ entry

There are 4 chains in PDB entry 2WOJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5ASP 352
B
 THR 4LEU 350
C
 VAL 5GLU 351
D
 VAL 5ASP 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 2WOJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed alpha
Helix 2
2
A
31 46Right-handed alpha
Helix 3
3
A
61 66Right-handed alpha
Helix 4
4
A
89 99Right-handed alpha
Helix 5
5
A
125 130Right-handed alpha
Helix 6
6
A
136 154Right-handed alpha
Helix 7
7
A
172 178Right-handed alpha
Helix 8
8
A
178 189Right-handed alpha
Helix 9
9
A
215 231Right-handed alpha
Helix 10
10
A
245 262Right-handed alpha
Helix 11
11
A
285 306Right-handed alpha
Helix 12
12
A
324 336Right-handed alpha
Helix 13
13
A
345 351Right-handed 310
Helix 14
14
B
9 14Right-handed alpha
Helix 15
15
B
31 46Right-handed alpha
Helix 16
16
B
61 66Right-handed alpha
Helix 17
17
B
89 104Right-handed alpha
Helix 18
18
B
136 153Right-handed alpha
Helix 19
19
B
172 190Right-handed alpha
Helix 20
20
B
215 231Right-handed alpha
Helix 21
21
B
245 262Right-handed alpha
Helix 22
22
B
285 306Right-handed alpha
Helix 23
23
B
324 336Right-handed alpha
Helix 24
24
B
345 349Right-handed 310
Helix 25
25
C
9 14Right-handed alpha
Helix 26
26
C
31 46Right-handed alpha
Helix 27
27
C
61 66Right-handed alpha
Helix 28
28
C
89 98Right-handed alpha
Helix 29
29
C
136 151Right-handed alpha
Helix 30
30
C
172 188Right-handed alpha
Helix 31
31
C
215 231Right-handed alpha
Helix 32
32
C
245 262Right-handed alpha
Helix 33
33
C
285 306Right-handed alpha
Helix 34
34
C
324 336Right-handed alpha
Helix 35
35
C
345 350Right-handed alpha
Helix 36
36
D
9 14Right-handed alpha
Helix 37
37
D
31 46Right-handed alpha
Helix 38
38
D
61 66Right-handed alpha
Helix 39
39
D
89 104Right-handed alpha
Helix 40
40
D
125 130Right-handed alpha
Helix 41
41
D
136 151Right-handed alpha
Helix 42
42
D
172 189Right-handed alpha
Helix 43
43
D
215 231Right-handed alpha
Helix 44
44
D
245 262Right-handed alpha
Helix 45
45
D
285 306Right-handed alpha
Helix 46
46
D
324 336Right-handed alpha
Helix 47
47
D
345 349Right-handed 310
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There are 4 sheets in PDB entry 2WOJ. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
51 55parallel
Strand 4
A
162 166parallel
Strand 5
A
20 23parallel
Strand 6
A
236 243parallel
Strand 7
A
268 274parallel
Strand 8
A
310 315parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 87anti-parallel
Strand 3
B
51 55parallel
Strand 4
B
162 166parallel
Strand 5
B
20 23parallel
Strand 6
B
236 243parallel
Strand 7
B
266 274parallel
Strand 8
B
310 315parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
75 76first strand
Strand 2
C
83 87anti-parallel
Strand 3
C
51 55parallel
Strand 4
C
162 166parallel
Strand 5
C
20 23parallel
Strand 6
C
236 243parallel
Strand 7
C
266 274parallel
Strand 8
C
310 315parallel
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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
75 76first strand
Strand 2
D
83 87anti-parallel
Strand 3
D
51 55parallel
Strand 4
D
162 166parallel
Strand 5
D
20 23parallel
Strand 6
D
236 243parallel
Strand 7
D
268 274parallel
Strand 8
D
310 315parallel
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