Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WOO entry

There are 5 chains in PDB entry 2WOO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 7	VAL 322
B	PRO 7	VAL 322
C	PRO 7	VAL 322
D	PRO 7	VAL 322
E	PRO 7	GLU 86

There are 80 helices in PDB entry 2WOO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	10	16	Right-handed alpha
Helix 2	2	A	32	45	Right-handed alpha
Helix 3	3	A	59	65	Right-handed alpha
Helix 4	4	A	88	99	Right-handed alpha
Helix 5	5	A	112	118	Right-handed alpha
Helix 6	6	A	123	139	Right-handed alpha
Helix 7	7	A	156	158	Right-handed 310
Helix 8	8	A	159	168	Right-handed alpha
Helix 9	9	A	180	185	Right-handed alpha
Helix 10	10	A	201	217	Right-handed alpha
Helix 11	11	A	231	249	Right-handed alpha
Helix 12	12	A	268	289	Right-handed alpha
Helix 13	13	A	308	319	Right-handed alpha
Helix 14	14	B	10	16	Right-handed alpha
Helix 15	15	B	32	45	Right-handed alpha
Helix 16	16	B	59	65	Right-handed alpha
Helix 17	17	B	88	99	Right-handed alpha
Helix 18	18	B	112	118	Right-handed alpha
Helix 19	19	B	123	139	Right-handed alpha
Helix 20	20	B	156	158	Right-handed 310
Helix 21	21	B	159	168	Right-handed alpha
Helix 22	22	B	180	185	Right-handed alpha
Helix 23	23	B	201	217	Right-handed alpha
Helix 24	24	B	231	249	Right-handed alpha
Helix 25	25	B	268	289	Right-handed alpha
Helix 26	26	B	308	314	Right-handed alpha
Helix 27	27	B	314	319	Right-handed alpha
Helix 28	28	C	10	16	Right-handed alpha
Helix 29	29	C	32	45	Right-handed alpha
Helix 30	30	C	59	65	Right-handed alpha
Helix 31	31	C	88	99	Right-handed alpha
Helix 32	32	C	112	118	Right-handed alpha
Helix 33	33	C	123	139	Right-handed alpha
Helix 34	34	C	156	158	Right-handed 310
Helix 35	35	C	159	168	Right-handed alpha
Helix 36	36	C	180	185	Right-handed alpha
Helix 37	37	C	201	217	Right-handed alpha
Helix 38	38	C	231	249	Right-handed alpha
Helix 39	39	C	268	289	Right-handed alpha
Helix 40	40	C	308	314	Right-handed alpha
Helix 41	41	C	314	319	Right-handed alpha
Helix 42	42	D	10	16	Right-handed alpha
Helix 43	43	D	32	45	Right-handed alpha
Helix 44	44	D	59	65	Right-handed alpha
Helix 45	45	D	88	99	Right-handed alpha
Helix 46	46	D	112	118	Right-handed alpha
Helix 47	47	D	123	139	Right-handed alpha
Helix 48	48	D	156	158	Right-handed 310
Helix 49	49	D	159	168	Right-handed alpha
Helix 50	50	D	180	185	Right-handed alpha
Helix 51	51	D	201	217	Right-handed alpha
Helix 52	52	D	231	249	Right-handed alpha
Helix 53	53	D	268	289	Right-handed alpha
Helix 54	54	D	308	319	Right-handed alpha
Helix 55	55	E	10	16	Right-handed alpha
Helix 56	56	E	32	45	Right-handed alpha
Helix 57	57	E	59	65	Right-handed alpha
Helix 58	58	E	88	99	Right-handed alpha
Helix 59	59	E	112	118	Right-handed alpha
Helix 60	60	E	123	139	Right-handed alpha
Helix 61	61	E	156	158	Right-handed 310
Helix 62	62	E	159	168	Right-handed alpha
Helix 63	63	E	180	185	Right-handed alpha
Helix 64	64	E	201	217	Right-handed alpha
Helix 65	65	E	231	249	Right-handed alpha
Helix 66	66	E	268	289	Right-handed alpha
Helix 67	67	E	308	319	Right-handed alpha
Helix 68	68	F	10	16	Right-handed alpha
Helix 69	69	F	32	45	Right-handed alpha
Helix 70	70	F	59	65	Right-handed alpha
Helix 71	71	F	88	99	Right-handed alpha
Helix 72	72	F	112	118	Right-handed alpha
Helix 73	73	F	123	140	Right-handed alpha
Helix 74	74	F	156	158	Right-handed 310
Helix 75	75	F	159	168	Right-handed alpha
Helix 76	76	F	180	185	Right-handed alpha
Helix 77	77	F	201	217	Right-handed alpha
Helix 78	78	F	231	249	Right-handed alpha
Helix 79	79	F	268	289	Right-handed alpha
Helix 80	80	F	308	319	Right-handed alpha

There are 6 sheets in PDB entry 2WOO. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A, EA, FA,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	75	first strand
Strand 2	A	82	86	anti-parallel
Strand 3	A	50	54	parallel
Strand 4	A	143	147	parallel
Strand 5	A	21	24	parallel
Strand 6	A	222	229	parallel
Strand 7	A	251	260	parallel
Strand 8	A	293	298	parallel

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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	75	first strand
Strand 2	B	82	86	anti-parallel
Strand 3	B	50	54	parallel
Strand 4	B	143	147	parallel
Strand 5	B	21	24	parallel
Strand 6	B	222	229	parallel
Strand 7	B	251	260	parallel
Strand 8	B	293	298	parallel

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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	82	86	anti-parallel
Strand 3	C	50	54	parallel
Strand 4	C	143	147	parallel
Strand 5	C	21	24	parallel
Strand 6	C	222	229	parallel
Strand 7	C	251	260	parallel
Strand 8	C	293	298	parallel

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There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	75	first strand
Strand 2	D	82	86	anti-parallel
Strand 3	D	50	54	parallel
Strand 4	D	143	147	parallel
Strand 5	D	21	24	parallel
Strand 6	D	222	229	parallel
Strand 7	D	251	260	parallel
Strand 8	D	293	298	parallel

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There are 8 strands in EA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	74	75	first strand
Strand 2	E	82	86	anti-parallel
Strand 3	E	50	54	parallel
Strand 4	E	143	147	parallel
Strand 5	E	21	24	parallel
Strand 6	E	222	229	parallel
Strand 7	E	251	260	parallel
Strand 8	E	293	298	parallel

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There are 8 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	74	75	first strand
Strand 2	F	82	86	anti-parallel
Strand 3	F	50	54	parallel
Strand 4	F	143	147	parallel
Strand 5	F	21	24	parallel
Strand 6	F	222	229	parallel
Strand 7	F	251	260	parallel
Strand 8	F	293	298	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WOO

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOO