Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WOV entry

There are 4 chains in PDB entry 2WOV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER -1	PRO 488
B	SER 2	LEU 487
C	SER -1	PRO 488
D	SER 2	PRO 488

There are 61 helices in PDB entry 2WOV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	21	27	Right-handed alpha
Helix 2	2	A	57	65	Right-handed alpha
Helix 3	3	A	67	77	Right-handed alpha
Helix 4	4	A	91	111	Right-handed alpha
Helix 5	5	A	177	182	Right-handed alpha
Helix 6	6	A	198	204	Right-handed alpha
Helix 7	7	A	206	211	Right-handed alpha
Helix 8	8	A	231	245	Right-handed alpha
Helix 9	9	A	334	341	Right-handed alpha
Helix 10	10	A	343	350	Right-handed alpha
Helix 11	11	A	378	386	Right-handed alpha
Helix 12	12	A	399	404	Right-handed alpha
Helix 13	13	A	434	439	Right-handed alpha
Helix 14	14	A	450	457	Right-handed alpha
Helix 15	15	A	464	470	Right-handed 310
Helix 16	16	B	21	26	Right-handed alpha
Helix 17	17	B	57	65	Right-handed alpha
Helix 18	18	B	68	76	Right-handed alpha
Helix 19	19	B	91	111	Right-handed alpha
Helix 20	20	B	113	117	Right-handed 310
Helix 21	21	B	177	182	Right-handed alpha
Helix 22	22	B	198	204	Right-handed alpha
Helix 23	23	B	206	211	Right-handed alpha
Helix 24	24	B	231	245	Right-handed alpha
Helix 25	25	B	334	341	Right-handed alpha
Helix 26	26	B	343	350	Right-handed alpha
Helix 27	27	B	378	386	Right-handed alpha
Helix 28	28	B	399	404	Right-handed alpha
Helix 29	29	B	443	448	Right-handed 310
Helix 30	30	B	450	457	Right-handed alpha
Helix 31	31	B	464	470	Right-handed 310
Helix 32	32	C	21	26	Right-handed alpha
Helix 33	33	C	57	65	Right-handed alpha
Helix 34	34	C	67	76	Right-handed alpha
Helix 35	35	C	91	111	Right-handed alpha
Helix 36	36	C	177	182	Right-handed alpha
Helix 37	37	C	198	204	Right-handed alpha
Helix 38	38	C	206	211	Right-handed alpha
Helix 39	39	C	231	245	Right-handed alpha
Helix 40	40	C	334	341	Right-handed alpha
Helix 41	41	C	343	350	Right-handed alpha
Helix 42	42	C	378	386	Right-handed alpha
Helix 43	43	C	398	403	Right-handed 310
Helix 44	44	C	434	439	Right-handed alpha
Helix 45	45	C	450	457	Right-handed alpha
Helix 46	46	C	464	470	Right-handed 310
Helix 47	47	D	21	26	Right-handed alpha
Helix 48	48	D	57	65	Right-handed alpha
Helix 49	49	D	68	76	Right-handed alpha
Helix 50	50	D	91	111	Right-handed alpha
Helix 51	51	D	177	182	Right-handed alpha
Helix 52	52	D	198	204	Right-handed alpha
Helix 53	53	D	206	211	Right-handed alpha
Helix 54	54	D	231	245	Right-handed alpha
Helix 55	55	D	334	341	Right-handed alpha
Helix 56	56	D	343	350	Right-handed alpha
Helix 57	57	D	378	386	Right-handed alpha
Helix 58	58	D	398	404	Right-handed alpha
Helix 59	59	D	443	448	Right-handed 310
Helix 60	60	D	450	457	Right-handed alpha
Helix 61	61	D	464	470	Right-handed 310

There are 19 sheets in PDB entry 2WOV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, CA, CB, CC, CD, CE, A, DB, C, DD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	123	first strand
Strand 2	A	31	34	parallel
Strand 3	A	3	10	parallel
Strand 4	A	147	158	parallel
Strand 5	A	134	138	anti-parallel
Strand 6	A	129	131	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	121	123	first strand
Strand 2	A	31	34	parallel
Strand 3	A	3	10	parallel
Strand 4	A	147	158	parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	248	251	first strand
Strand 2	A	217	221	parallel
Strand 3	A	191	194	parallel
Strand 4	A	280	283	parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	260	first strand
Strand 2	A	266	270	anti-parallel
Strand 3	A	275	278	anti-parallel

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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	430	first strand
Strand 2	A	411	418	anti-parallel
Strand 3	A	389	396	anti-parallel
Strand 4	A	476	478	anti-parallel
Strand 5	A	483	484	anti-parallel

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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	123	first strand
Strand 2	B	31	34	parallel
Strand 3	B	3	10	parallel
Strand 4	B	149	158	parallel
Strand 5	B	134	137	anti-parallel
Strand 6	B	129	131	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	121	123	first strand
Strand 2	B	31	34	parallel
Strand 3	B	3	10	parallel
Strand 4	B	149	158	parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	248	251	first strand
Strand 2	B	217	221	parallel
Strand 3	B	191	194	parallel
Strand 4	B	280	283	parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	260	first strand
Strand 2	B	266	270	anti-parallel
Strand 3	B	275	278	anti-parallel

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There are 5 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	430	first strand
Strand 2	B	411	418	anti-parallel
Strand 3	B	388	396	anti-parallel
Strand 4	B	476	479	anti-parallel
Strand 5	B	483	484	anti-parallel

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There are 6 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	123	first strand
Strand 2	C	31	34	parallel
Strand 3	C	3	10	parallel
Strand 4	C	147	158	parallel
Strand 5	C	134	138	anti-parallel
Strand 6	C	129	131	anti-parallel

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There are 4 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	121	123	first strand
Strand 2	C	31	34	parallel
Strand 3	C	3	10	parallel
Strand 4	C	147	158	parallel

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There are 4 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	250	first strand
Strand 2	C	217	220	parallel
Strand 3	C	191	194	parallel
Strand 4	C	280	283	parallel

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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	260	first strand
Strand 2	C	266	270	anti-parallel
Strand 3	C	275	278	anti-parallel

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There are 5 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	428	430	first strand
Strand 2	C	411	418	anti-parallel
Strand 3	C	388	396	anti-parallel
Strand 4	C	476	479	anti-parallel
Strand 5	C	483	484	anti-parallel

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There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	121	123	first strand
Strand 2	D	31	34	parallel
Strand 3	D	3	10	parallel
Strand 4	D	147	158	parallel
Strand 5	D	129	131	first strand
Strand 6	D	134	138	anti-parallel
Strand 7	D	147	158	anti-parallel
Strand 8	D	322	324	parallel
Strand 9	D	147	158	parallel

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There are 4 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	248	250	first strand
Strand 2	D	217	220	parallel
Strand 3	D	191	194	parallel
Strand 4	D	280	283	parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	255	260	first strand
Strand 2	D	266	270	anti-parallel
Strand 3	D	275	278	anti-parallel

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There are 5 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	428	430	first strand
Strand 2	D	411	418	anti-parallel
Strand 3	D	388	396	anti-parallel
Strand 4	D	476	479	anti-parallel
Strand 5	D	483	484	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WOV

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WOV