Analysis of interatomic Contacts of Structural Units in PDB entry:
2WPV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WPV entry

There are 8 chains in PDB entry 2WPV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 12VAL 292
B
 GLY 7GLN 54
C
 ALA 11VAL 292
D
 GLY 7GLN 54
E
 LEU 13VAL 292
F
 GLY 7LYS 53
G
 LYS 12VAL 292
H
 GLY 7GLN 54
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 2WPV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
29 46Right-handed alpha
Helix 3
3
A
49 66Right-handed alpha
Helix 4
4
A
69 86Right-handed alpha
Helix 5
5
A
92 104Right-handed alpha
Helix 6
6
A
112 126Right-handed alpha
Helix 7
7
A
134 147Right-handed alpha
Helix 8
8
A
150 159Right-handed alpha
Helix 9
9
A
162 179Right-handed alpha
Helix 10
10
A
184 201Right-handed alpha
Helix 11
11
A
204 222Right-handed alpha
Helix 12
12
A
243 257Right-handed alpha
Helix 13
13
A
260 269Right-handed alpha
Helix 14
14
A
271 289Right-handed alpha
Helix 15
15
B
8 21Right-handed alpha
Helix 16
16
B
35 37Right-handed 310
Helix 17
17
C
13 26Right-handed alpha
Helix 18
18
C
29 46Right-handed alpha
Helix 19
19
C
49 66Right-handed alpha
Helix 20
20
C
69 86Right-handed alpha
Helix 21
21
C
92 104Right-handed alpha
Helix 22
22
C
112 126Right-handed alpha
Helix 23
23
C
134 147Right-handed alpha
Helix 24
24
C
150 159Right-handed alpha
Helix 25
25
C
162 179Right-handed alpha
Helix 26
26
C
184 201Right-handed alpha
Helix 27
27
C
204 222Right-handed alpha
Helix 28
28
C
243 257Right-handed alpha
Helix 29
29
C
260 269Right-handed alpha
Helix 30
30
C
271 289Right-handed alpha
Helix 31
31
D
8 21Right-handed alpha
Helix 32
32
D
35 37Right-handed 310
Helix 33
33
E
13 26Right-handed alpha
Helix 34
34
E
29 46Right-handed alpha
Helix 35
35
E
49 66Right-handed alpha
Helix 36
36
E
69 86Right-handed alpha
Helix 37
37
E
92 104Right-handed alpha
Helix 38
38
E
112 126Right-handed alpha
Helix 39
39
E
134 147Right-handed alpha
Helix 40
40
E
150 159Right-handed alpha
Helix 41
41
E
162 179Right-handed alpha
Helix 42
42
E
184 201Right-handed alpha
Helix 43
43
E
204 222Right-handed alpha
Helix 44
44
E
243 257Right-handed alpha
Helix 45
45
E
260 269Right-handed alpha
Helix 46
46
E
271 289Right-handed alpha
Helix 47
47
F
8 21Right-handed alpha
Helix 48
48
F
35 37Right-handed 310
Helix 49
49
G
13 26Right-handed alpha
Helix 50
50
G
29 46Right-handed alpha
Helix 51
51
G
49 66Right-handed alpha
Helix 52
52
G
69 86Right-handed alpha
Helix 53
53
G
92 104Right-handed alpha
Helix 54
54
G
112 126Right-handed alpha
Helix 55
55
G
134 147Right-handed alpha
Helix 56
56
G
150 159Right-handed alpha
Helix 57
57
G
162 179Right-handed alpha
Helix 58
58
G
184 201Right-handed alpha
Helix 59
59
G
204 222Right-handed alpha
Helix 60
60
G
243 257Right-handed alpha
Helix 61
61
G
260 269Right-handed alpha
Helix 62
62
G
271 289Right-handed alpha
Helix 63
63
H
8 21Right-handed alpha
Helix 64
64
H
35 37Right-handed 310
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There are 4 sheets in PDB entry 2WPV. Click on sheet of interest to get list of strands forming it: AA, CA, EA, GA,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 231first strand
Strand 2
A
234 239anti-parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 231first strand
Strand 2
C
234 239anti-parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
226 231first strand
Strand 2
E
234 239anti-parallel
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There are 2 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
226 231first strand
Strand 2
G
234 239anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il