Analysis of interatomic Contacts of Structural Units in PDB entry:
2WR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WR8 entry

There is 1 chain in PDB entry 2WR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -2LEU 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2WR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 26Right-handed alpha
Helix 2
2
A
47 57Right-handed alpha
Helix 3
3
A
96 101Right-handed 310
Helix 4
4
A
110 118Right-handed alpha
Helix 5
5
A
144 148Right-handed 310
Helix 6
6
A
153 157Right-handed 310
Helix 7
7
A
238 244Right-handed alpha
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There are 3 sheets in PDB entry 2WR8. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
1 5parallel
Strand 3
A
62 64parallel
Strand 4
A
85 89parallel
Strand 5
A
77 81anti-parallel
Strand 6
A
105 108anti-parallel
Strand 7
A
151 152anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
A
171 178anti-parallel
Strand 3
A
250 256anti-parallel
Strand 4
A
196 199anti-parallel
Strand 5
A
204 207anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 166first strand
Strand 2
A
171 178anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il