Analysis of interatomic Contacts of Structural Units in PDB entry:
2WRB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WRB entry

There are 3 chains in PDB entry 2WRB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 9	ASP 487
B	ASP 5	SER 495
C	ILE 7	VAL 315

There are 33 helices in PDB entry 2WRB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	68	72	Right-handed 310
Helix 2	2	A	101	110	Right-handed alpha
Helix 3	3	A	122	126	Right-handed 310
Helix 4	4	A	135	139	Right-handed 310
Helix 5	5	A	186	195	Right-handed alpha
Helix 6	6	A	366	375	Right-handed alpha
Helix 7	7	A	377	387	Right-handed alpha
Helix 8	8	A	400	402	Right-handed 310
Helix 9	9	A	403	415	Right-handed alpha
Helix 10	10	A	417	456	Right-handed alpha
Helix 11	11	A	474	483	Right-handed alpha
Helix 12	12	B	68	72	Right-handed 310
Helix 13	13	B	101	110	Right-handed alpha
Helix 14	14	B	122	126	Right-handed 310
Helix 15	15	B	135	139	Right-handed 310
Helix 16	16	B	186	195	Right-handed alpha
Helix 17	17	B	366	375	Right-handed alpha
Helix 18	18	B	377	387	Right-handed alpha
Helix 19	19	B	400	402	Right-handed 310
Helix 20	20	B	403	415	Right-handed alpha
Helix 21	21	B	417	456	Right-handed alpha
Helix 22	22	B	474	483	Right-handed alpha
Helix 23	23	C	68	72	Right-handed 310
Helix 24	24	C	101	110	Right-handed alpha
Helix 25	25	C	122	126	Right-handed 310
Helix 26	26	C	135	139	Right-handed 310
Helix 27	27	C	186	195	Right-handed alpha
Helix 28	28	C	366	375	Right-handed alpha
Helix 29	29	C	377	387	Right-handed alpha
Helix 30	30	C	400	402	Right-handed 310
Helix 31	31	C	403	415	Right-handed alpha
Helix 32	32	C	417	456	Right-handed alpha
Helix 33	33	C	457	459	Right-handed 310

There are 29 sheets in PDB entry 2WRB. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, CA, CB, CC, CD, CE, CF, CG, CH, CI,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	20	first strand
Strand 2	A	28	29	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	315	317	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	38	first strand
Strand 2	A	294	295	parallel
Strand 3	A	307	308	parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	55	first strand
Strand 2	A	83	85	parallel
Strand 3	A	268	269	parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	116	first strand
Strand 2	A	258	260	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	152	first strand
Strand 2	A	251	253	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	168	first strand
Strand 2	A	241	242	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	175	183	first strand
Strand 2	A	228	236	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	212	first strand
Strand 2	A	201	203	anti-parallel
Strand 3	A	245	246	anti-parallel

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There are 2 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	459	461	first strand
Strand 2	A	467	469	anti-parallel

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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	7	first strand
Strand 2	B	467	469	anti-parallel
Strand 3	B	459	461	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	20	first strand
Strand 2	B	28	29	anti-parallel

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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	35	first strand
Strand 2	B	315	317	anti-parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	38	first strand
Strand 2	B	294	295	parallel
Strand 3	B	307	308	parallel

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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	55	first strand
Strand 2	B	83	85	parallel
Strand 3	B	268	269	parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	116	first strand
Strand 2	B	258	260	anti-parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	152	first strand
Strand 2	B	251	253	anti-parallel

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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	167	168	first strand
Strand 2	B	241	242	anti-parallel

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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	183	first strand
Strand 2	B	228	236	anti-parallel

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There are 3 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	212	first strand
Strand 2	B	201	203	anti-parallel
Strand 3	B	245	246	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	20	first strand
Strand 2	C	28	29	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	35	first strand
Strand 2	C	315	317	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	38	first strand
Strand 2	C	294	295	parallel
Strand 3	C	307	308	parallel

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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	55	first strand
Strand 2	C	83	85	parallel
Strand 3	C	268	269	parallel

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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	116	first strand
Strand 2	C	258	260	anti-parallel

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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	152	first strand
Strand 2	C	251	253	anti-parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	167	168	first strand
Strand 2	C	241	242	anti-parallel

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There are 2 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	175	183	first strand
Strand 2	C	228	236	anti-parallel

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There are 3 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	212	first strand
Strand 2	C	201	203	anti-parallel
Strand 3	C	245	246	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WRB

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WRB