Analysis of interatomic Contacts of Structural Units in PDB entry:
2WRM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WRM entry

There is 1 chain in PDB entry 2WRM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LYS 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 2WRM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 31Right-handed alpha
Helix 2
2
A
33 35Right-handed 310
Helix 3
3
A
41 45Right-handed 310
Helix 4
4
A
47 53Right-handed alpha
Helix 5
5
A
61 76Right-handed alpha
Helix 6
6
A
84 91Right-handed alpha
Helix 7
7
A
105 110Right-handed alpha
Helix 8
8
A
112 129Right-handed alpha
Helix 9
9
A
167 180Right-handed alpha
Helix 10
10
A
181 187Right-handed alpha
Helix 11
11
A
199 211Right-handed alpha
Helix 12
12
A
223 228Right-handed alpha
Helix 13
13
A
229 243Right-handed alpha
Helix 14
14
A
246 260Right-handed alpha
Helix 15
15
A
291 306Right-handed alpha
Helix 16
16
A
329 346Right-handed alpha
Helix 17
17
A
359 363Right-handed 310
Helix 18
18
A
388 401Right-handed alpha
Helix 19
19
A
418 424Right-handed alpha
Helix 20
20
A
424 436Right-handed alpha
Helix 21
21
A
455 457Right-handed 310
Helix 22
22
A
458 467Right-handed alpha
Helix 23
23
A
469 473Right-handed 310
Helix 24
24
A
481 492Right-handed alpha
Helix 25
25
A
496 514Right-handed alpha
Helix 26
26
A
526 531Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 2WRM. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
144 146anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 162first strand
Strand 2
A
136 140anti-parallel
Strand 3
A
266 267parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 219first strand
Strand 2
A
320 325anti-parallel
Strand 3
A
309 315anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 374first strand
Strand 2
A
380 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
443 446first strand
Strand 2
A
451 454anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il