Analysis of interatomic Contacts of Structural Units in PDB entry:
2WSM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WSM entry

There are 2 chains in PDB entry 2WSM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 11ASN 213
B
 ASP 9ILE 211
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2WSM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 28Right-handed alpha
Helix 2
2
A
43 54Right-handed alpha
Helix 3
3
A
69 78Right-handed alpha
Helix 4
4
A
95 101Right-handed alpha
Helix 5
5
A
102 107Right-handed 310
Helix 6
6
A
121 126Right-handed 310
Helix 7
7
A
139 141Right-handed 310
Helix 8
8
A
144 149Right-handed alpha
Helix 9
9
A
149 155Right-handed alpha
Helix 10
10
A
163 167Right-handed 310
Helix 11
11
A
173 185Right-handed alpha
Helix 12
12
A
201 212Right-handed alpha
Helix 13
13
B
11 28Right-handed alpha
Helix 14
14
B
43 52Right-handed alpha
Helix 15
15
B
95 103Right-handed alpha
Helix 16
16
B
104 107Right-handed 310
Helix 17
17
B
121 126Right-handed 310
Helix 18
18
B
139 141Right-handed 310
Helix 19
19
B
144 149Right-handed alpha
Helix 20
20
B
149 154Right-handed alpha
Helix 21
21
B
164 167Right-handed 310
Helix 22
22
B
173 185Right-handed alpha
Helix 23
23
B
201 210Right-handed alpha
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There are 4 sheets in PDB entry 2WSM. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
31 36parallel
Strand 3
A
132 138parallel
Strand 4
A
158 162parallel
Strand 5
A
189 192parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
82 85parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 115first strand
Strand 2
B
31 36parallel
Strand 3
B
132 138parallel
Strand 4
B
158 162parallel
Strand 5
B
189 193parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
83 85parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il