Analysis of interatomic Contacts of Structural Units in PDB entry:
2WTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WTE entry

There are 2 chains in PDB entry 2WTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LYS 212
B
 MSE 1ILE 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 18 helices in PDB entry 2WTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 22Right-handed alpha
Helix 2
2
A
42 57Right-handed alpha
Helix 3
3
A
70 83Right-handed alpha
Helix 4
4
A
97 106Right-handed alpha
Helix 5
5
A
133 141Right-handed alpha
Helix 6
6
A
144 158Right-handed alpha
Helix 7
7
A
162 170Right-handed alpha
Helix 8
8
A
172 186Right-handed alpha
Helix 9
9
A
205 211Right-handed alpha
Helix 10
10
B
12 22Right-handed alpha
Helix 11
11
B
42 56Right-handed alpha
Helix 12
12
B
70 83Right-handed alpha
Helix 13
13
B
97 106Right-handed alpha
Helix 14
14
B
133 141Right-handed alpha
Helix 15
15
B
144 158Right-handed alpha
Helix 16
16
B
162 169Right-handed alpha
Helix 17
17
B
172 186Right-handed alpha
Helix 18
18
B
205 215Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2WTE. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 66first strand
Strand 2
A
29 35parallel
Strand 3
A
3 6parallel
Strand 4
A
89 92parallel
Strand 5
A
115 120parallel
Strand 6
A
128 132anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 192first strand
Strand 2
A
197 200anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 66first strand
Strand 2
B
29 35parallel
Strand 3
B
3 6parallel
Strand 4
B
89 92parallel
Strand 5
B
115 120parallel
Strand 6
B
128 132anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 190first strand
Strand 2
B
199 200anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il