Analysis of interatomic Contacts of Structural Units in PDB entry:
2WTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WTF entry

There are 6 chains in PDB entry 2WTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 509
B
 MET 1ILE 508
O
 T -6 C 10
P
 G 1 C 9
S
 T -1 C 10
T
 G 1 C 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 2WTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 11Right-handed alpha
Helix 2
2
A
17 21Right-handed 310
Helix 3
3
A
33 43Right-handed alpha
Helix 4
4
A
65 69Right-handed 310
Helix 5
5
A
76 82Right-handed alpha
Helix 6
6
A
128 146Right-handed alpha
Helix 7
7
A
163 172Right-handed alpha
Helix 8
8
A
182 187Right-handed alpha
Helix 9
9
A
187 195Right-handed alpha
Helix 10
10
A
209 215Right-handed 310
Helix 11
11
A
232 240Right-handed alpha
Helix 12
12
A
248 256Right-handed alpha
Helix 13
13
A
267 276Right-handed alpha
Helix 14
14
A
290 297Right-handed alpha
Helix 15
15
A
301 305Right-handed 310
Helix 16
16
A
314 320Right-handed alpha
Helix 17
17
A
326 335Right-handed alpha
Helix 18
18
A
341 352Right-handed alpha
Helix 19
19
A
366 379Right-handed alpha
Helix 20
20
A
408 435Right-handed alpha
Helix 21
21
A
469 476Right-handed alpha
Helix 22
22
A
478 487Right-handed alpha
Helix 23
23
B
5 12Right-handed alpha
Helix 24
24
B
33 43Right-handed alpha
Helix 25
25
B
63 68Right-handed alpha
Helix 26
26
B
76 84Right-handed alpha
Helix 27
27
B
128 146Right-handed alpha
Helix 28
28
B
163 172Right-handed alpha
Helix 29
29
B
182 187Right-handed alpha
Helix 30
30
B
187 195Right-handed alpha
Helix 31
31
B
209 215Right-handed 310
Helix 32
32
B
232 240Right-handed alpha
Helix 33
33
B
248 256Right-handed alpha
Helix 34
34
B
267 278Right-handed alpha
Helix 35
35
B
287 289Right-handed 310
Helix 36
36
B
290 296Right-handed alpha
Helix 37
37
B
301 305Right-handed 310
Helix 38
38
B
314 320Right-handed alpha
Helix 39
39
B
326 335Right-handed alpha
Helix 40
40
B
341 351Right-handed alpha
Helix 41
41
B
356 360Right-handed 310
Helix 42
42
B
366 379Right-handed alpha
Helix 43
43
B
408 435Right-handed alpha
Helix 44
44
B
469 476Right-handed alpha
Helix 45
45
B
478 487Right-handed alpha
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There are 8 sheets in PDB entry 2WTF. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
156 160anti-parallel
Strand 3
A
26 31anti-parallel
Strand 4
A
260 262anti-parallel
Strand 5
A
282 283parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
51 55anti-parallel
Strand 3
A
88 91parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
93 96anti-parallel
Strand 3
A
124 127anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 400first strand
Strand 2
A
498 508anti-parallel
Strand 3
A
438 448anti-parallel
Strand 4
A
454 457anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 153first strand
Strand 2
B
156 160anti-parallel
Strand 3
B
26 31anti-parallel
Strand 4
B
260 262anti-parallel
Strand 5
B
282 283parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
51 55anti-parallel
Strand 3
B
88 91parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
93 96anti-parallel
Strand 3
B
124 127anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
395 400first strand
Strand 2
B
498 506anti-parallel
Strand 3
B
440 448anti-parallel
Strand 4
B
454 457anti-parallel
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