Analysis of interatomic Contacts of Structural Units in PDB entry:
2WTZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WTZ entry

There are 8 chains in PDB entry 2WTZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 26	ALA 261
A	ALA 263	ARG 533
B	LEU 26	ALA 261
B	ALA 263	ARG 533
C	THR 24	ALA 261
C	ALA 263	HIS 505
D	LEU 26	ALA 261
D	ALA 263	ALA 527

There are 63 helices in PDB entry 2WTZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	35	43	Right-handed alpha
Helix 2	2	A	68	72	Right-handed 310
Helix 3	3	A	134	139	Right-handed alpha
Helix 4	4	A	141	145	Right-handed 310
Helix 5	5	A	157	166	Right-handed alpha
Helix 6	6	A	198	212	Right-handed alpha
Helix 7	7	A	222	228	Right-handed alpha
Helix 8	8	A	254	264	Right-handed alpha
Helix 9	9	A	287	294	Right-handed alpha
Helix 10	10	A	342	358	Right-handed alpha
Helix 11	11	A	361	366	Right-handed alpha
Helix 12	12	A	396	406	Right-handed alpha
Helix 13	13	A	434	440	Right-handed alpha
Helix 14	14	A	454	464	Right-handed alpha
Helix 15	15	A	480	492	Right-handed alpha
Helix 16	16	A	521	530	Right-handed alpha
Helix 17	17	B	35	43	Right-handed alpha
Helix 18	18	B	53	58	Right-handed alpha
Helix 19	19	B	68	72	Right-handed 310
Helix 20	20	B	134	139	Right-handed alpha
Helix 21	21	B	141	145	Right-handed 310
Helix 22	22	B	157	166	Right-handed alpha
Helix 23	23	B	198	212	Right-handed alpha
Helix 24	24	B	222	228	Right-handed alpha
Helix 25	25	B	254	264	Right-handed alpha
Helix 26	26	B	287	294	Right-handed alpha
Helix 27	27	B	342	358	Right-handed alpha
Helix 28	28	B	361	366	Right-handed alpha
Helix 29	29	B	396	406	Right-handed alpha
Helix 30	30	B	434	440	Right-handed alpha
Helix 31	31	B	454	464	Right-handed alpha
Helix 32	32	B	480	492	Right-handed alpha
Helix 33	33	B	521	531	Right-handed alpha
Helix 34	34	C	35	43	Right-handed alpha
Helix 35	35	C	68	72	Right-handed 310
Helix 36	36	C	134	139	Right-handed alpha
Helix 37	37	C	141	145	Right-handed 310
Helix 38	38	C	157	166	Right-handed alpha
Helix 39	39	C	198	212	Right-handed alpha
Helix 40	40	C	222	228	Right-handed alpha
Helix 41	41	C	254	264	Right-handed alpha
Helix 42	42	C	287	294	Right-handed alpha
Helix 43	43	C	342	358	Right-handed alpha
Helix 44	44	C	361	366	Right-handed alpha
Helix 45	45	C	396	406	Right-handed alpha
Helix 46	46	C	454	464	Right-handed alpha
Helix 47	47	C	480	492	Right-handed alpha
Helix 48	48	D	35	43	Right-handed alpha
Helix 49	49	D	53	58	Right-handed alpha
Helix 50	50	D	68	72	Right-handed 310
Helix 51	51	D	134	139	Right-handed alpha
Helix 52	52	D	141	145	Right-handed 310
Helix 53	53	D	157	166	Right-handed alpha
Helix 54	54	D	198	212	Right-handed alpha
Helix 55	55	D	222	228	Right-handed alpha
Helix 56	56	D	254	264	Right-handed alpha
Helix 57	57	D	287	294	Right-handed alpha
Helix 58	58	D	342	358	Right-handed alpha
Helix 59	59	D	361	366	Right-handed alpha
Helix 60	60	D	396	406	Right-handed alpha
Helix 61	61	D	434	440	Right-handed alpha
Helix 62	62	D	480	492	Right-handed alpha
Helix 63	63	D	521	526	Right-handed alpha

There are 16 sheets in PDB entry 2WTZ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD, CA, CB, CC, CD, A, DB, C, DD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	47	first strand
Strand 2	A	121	123	anti-parallel
Strand 3	A	102	105	parallel
Strand 4	A	77	80	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	A	216	218	parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	278	280	first strand
Strand 2	A	297	300	parallel
Strand 3	A	308	314	parallel
Strand 4	A	322	326	anti-parallel
Strand 5	A	334	335	anti-parallel

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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	379	380	first strand
Strand 2	A	388	391	anti-parallel
Strand 3	A	497	500	parallel
Strand 4	A	414	418	parallel
Strand 5	A	442	445	parallel
Strand 6	A	474	477	parallel

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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	47	first strand
Strand 2	B	121	123	anti-parallel
Strand 3	B	102	105	parallel
Strand 4	B	77	79	parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	149	first strand
Strand 2	B	216	218	parallel

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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	280	first strand
Strand 2	B	297	300	parallel
Strand 3	B	308	314	parallel
Strand 4	B	322	326	anti-parallel
Strand 5	B	334	335	anti-parallel

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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	379	380	first strand
Strand 2	B	388	391	anti-parallel
Strand 3	B	497	500	parallel
Strand 4	B	414	418	parallel
Strand 5	B	442	445	parallel
Strand 6	B	474	477	parallel

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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	121	123	anti-parallel
Strand 3	C	102	105	parallel
Strand 4	C	77	79	parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	149	first strand
Strand 2	C	216	218	parallel

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There are 5 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	278	280	first strand
Strand 2	C	297	300	parallel
Strand 3	C	308	314	parallel
Strand 4	C	322	326	anti-parallel
Strand 5	C	334	335	anti-parallel

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There are 5 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	388	391	first strand
Strand 2	C	497	500	parallel
Strand 3	C	414	418	parallel
Strand 4	C	442	445	parallel
Strand 5	C	475	477	parallel

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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	47	first strand
Strand 2	D	121	123	anti-parallel
Strand 3	D	102	105	parallel
Strand 4	D	77	80	parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	149	first strand
Strand 2	D	216	218	parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	280	first strand
Strand 2	D	297	300	parallel
Strand 3	D	308	314	parallel
Strand 4	D	322	326	anti-parallel
Strand 5	D	334	335	anti-parallel

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There are 6 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	379	380	first strand
Strand 2	D	389	391	anti-parallel
Strand 3	D	498	500	parallel
Strand 4	D	415	418	parallel
Strand 5	D	442	445	parallel
Strand 6	D	474	477	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WTZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WTZ