Analysis of interatomic Contacts of Structural Units in PDB entry:
2WUA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WUA entry

There are 2 chains in PDB entry 2WUA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 47ASP 438
B
 VAL 45ASP 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 2WUA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 89Right-handed alpha
Helix 2
2
A
91 95Right-handed 310
Helix 3
3
A
108 121Right-handed alpha
Helix 4
4
A
134 138Right-handed 310
Helix 5
5
A
140 152Right-handed alpha
Helix 6
6
A
178 183Right-handed 310
Helix 7
7
A
184 190Right-handed alpha
Helix 8
8
A
196 206Right-handed alpha
Helix 9
9
A
208 217Right-handed alpha
Helix 10
10
A
219 229Right-handed alpha
Helix 11
11
A
267 273Right-handed alpha
Helix 12
12
A
304 310Right-handed alpha
Helix 13
13
A
327 331Right-handed 310
Helix 14
14
A
337 346Right-handed alpha
Helix 15
15
A
349 353Right-handed 310
Helix 16
16
A
362 374Right-handed alpha
Helix 17
17
A
376 379Right-handed 310
Helix 18
18
A
398 411Right-handed alpha
Helix 19
19
B
72 89Right-handed alpha
Helix 20
20
B
91 95Right-handed 310
Helix 21
21
B
108 121Right-handed alpha
Helix 22
22
B
134 138Right-handed 310
Helix 23
23
B
140 152Right-handed alpha
Helix 24
24
B
180 183Right-handed 310
Helix 25
25
B
184 190Right-handed alpha
Helix 26
26
B
196 206Right-handed alpha
Helix 27
27
B
208 217Right-handed alpha
Helix 28
28
B
219 229Right-handed alpha
Helix 29
29
B
267 273Right-handed alpha
Helix 30
30
B
304 310Right-handed alpha
Helix 31
31
B
327 331Right-handed 310
Helix 32
32
B
337 346Right-handed alpha
Helix 33
33
B
349 353Right-handed 310
Helix 34
34
B
362 374Right-handed alpha
Helix 35
35
B
376 379Right-handed 310
Helix 36
36
B
398 411Right-handed alpha
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There are 9 sheets in PDB entry 2WUA. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 55first strand
Strand 2
A
299 303anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
293 294anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
129 133parallel
Strand 3
B
129 133anti-parallel
Strand 4
B
98 100parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 244first strand
Strand 2
A
251 256anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 322first strand
Strand 2
A
431 434anti-parallel
Strand 3
A
420 421anti-parallel
Strand 4
A
357 358parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 55first strand
Strand 2
B
299 303anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
293 294anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 244first strand
Strand 2
B
251 256anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
318 322first strand
Strand 2
B
431 434anti-parallel
Strand 3
B
420 421anti-parallel
Strand 4
B
357 358parallel
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