Analysis of interatomic Contacts of Structural Units in PDB entry:
2WUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WUQ entry

There are 2 chains in PDB entry 2WUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3HIS 316
B
 VAL 1HIS 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2WUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 17Right-handed alpha
Helix 2
2
A
45 48Right-handed 310
Helix 3
3
A
49 63Right-handed alpha
Helix 4
4
A
98 108Right-handed alpha
Helix 5
5
A
112 121Right-handed alpha
Helix 6
6
A
122 133Right-handed alpha
Helix 7
7
A
179 183Right-handed 310
Helix 8
8
A
191 204Right-handed alpha
Helix 9
9
A
205 207Right-handed 310
Helix 10
10
A
220 233Right-handed alpha
Helix 11
11
A
240 245Right-handed alpha
Helix 12
12
A
294 316Right-handed alpha
Helix 13
13
B
3 17Right-handed alpha
Helix 14
14
B
45 48Right-handed 310
Helix 15
15
B
49 63Right-handed alpha
Helix 16
16
B
98 108Right-handed alpha
Helix 17
17
B
112 121Right-handed alpha
Helix 18
18
B
122 133Right-handed alpha
Helix 19
19
B
179 183Right-handed 310
Helix 20
20
B
191 204Right-handed alpha
Helix 21
21
B
205 207Right-handed 310
Helix 22
22
B
220 233Right-handed alpha
Helix 23
23
B
240 245Right-handed alpha
Helix 24
24
B
294 312Right-handed alpha
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There are 4 sheets in PDB entry 2WUQ. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
275 283anti-parallel
Strand 4
A
261 270anti-parallel
Strand 5
A
249 254anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 74first strand
Strand 2
A
94 97anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
21 28anti-parallel
Strand 3
B
275 283anti-parallel
Strand 4
B
261 270anti-parallel
Strand 5
B
249 254anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 74first strand
Strand 2
B
94 97anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il