Analysis of interatomic Contacts of Structural Units in PDB entry:
2WVA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WVA entry

There are 3 chains in PDB entry 2WVA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2LYS 566
B
SER 2LYS 566
E
SER 2ALA 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are217 helices in PDB entry 2WVA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
5 16Right-handed alpha
Helix 2
2
A
29 38Right-handed alpha
Helix 3
3
A
49 65Right-handed alpha
Helix 4
4
A
76 90Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
122 130Right-handed alpha
Helix 7
7
A
140 142Right-handed 310
Helix 8
8
A
143 159Right-handed alpha
Helix 9
9
A
180 185Right-handed 310
Helix 10
10
A
191 207Right-handed alpha
Helix 11
11
A
225 237Right-handed alpha
Helix 12
12
A
245 247Right-handed 310
Helix 13
13
A
262 266Right-handed 310
Helix 14
14
A
269 277Right-handed alpha
Helix 15
15
A
300 302Right-handed 310
Helix 16
16
A
323 335Right-handed alpha
Helix 17
17
A
339 348Right-handed alpha
Helix 18
18
A
366 376Right-handed alpha
Helix 19
19
A
389 397Right-handed alpha
Helix 20
20
A
417 429Right-handed alpha
Helix 21
21
A
440 447Right-handed alpha
Helix 22
22
A
448 456Right-handed alpha
Helix 23
23
A
470 475Right-handed alpha
Helix 24
24
A
479 483Right-handed 310
Helix 25
25
A
488 498Right-handed alpha
Helix 26
26
A
514 528Right-handed alpha
Helix 27
27
A
545 561Right-handed alpha
Helix 28
28
B
5 16Right-handed alpha
Helix 29
29
B
29 38Right-handed alpha
Helix 30
30
B
49 65Right-handed alpha
Helix 31
31
B
76 90Right-handed alpha
Helix 32
32
B
102 106Right-handed 310
Helix 33
33
B
122 130Right-handed alpha
Helix 34
34
B
140 142Right-handed 310
Helix 35
35
B
143 159Right-handed alpha
Helix 36
36
B
181 186Right-handed alpha
Helix 37
37
B
191 207Right-handed alpha
Helix 38
38
B
225 237Right-handed alpha
Helix 39
39
B
245 247Right-handed 310
Helix 40
40
B
262 266Right-handed 310
Helix 41
41
B
269 277Right-handed alpha
Helix 42
42
B
300 302Right-handed 310
Helix 43
43
B
323 335Right-handed alpha
Helix 44
44
B
339 348Right-handed alpha
Helix 45
45
B
366 376Right-handed alpha
Helix 46
46
B
389 397Right-handed alpha
Helix 47
47
B
417 429Right-handed alpha
Helix 48
48
B
440 447Right-handed alpha
Helix 49
49
B
449 456Right-handed alpha
Helix 50
50
B
470 475Right-handed alpha
Helix 51
51
B
479 483Right-handed 310
Helix 52
52
B
488 498Right-handed alpha
Helix 53
53
B
514 528Right-handed alpha
Helix 54
54
B
545 561Right-handed alpha
Helix 55
55
E
5 16Right-handed alpha
Helix 56
56
E
29 38Right-handed alpha
Helix 57
57
E
49 65Right-handed alpha
Helix 58
58
E
76 90Right-handed alpha
Helix 59
59
E
102 106Right-handed 310
Helix 60
60
E
122 130Right-handed alpha
Helix 61
61
E
140 142Right-handed 310
Helix 62
62
E
143 159Right-handed alpha
Helix 63
63
E
181 186Right-handed alpha
Helix 64
64
E
191 207Right-handed alpha
Helix 65
65
E
225 237Right-handed alpha
Helix 66
66
E
245 247Right-handed 310
Helix 67
67
E
262 266Right-handed 310
Helix 68
68
E
269 277Right-handed alpha
Helix 69
69
E
300 302Right-handed 310
Helix 70
70
E
323 335Right-handed alpha
Helix 71
71
E
339 348Right-handed alpha
Helix 72
72
E
366 376Right-handed alpha
Helix 73
73
E
389 397Right-handed alpha
Helix 74
74
E
417 429Right-handed alpha
Helix 75
75
E
440 447Right-handed alpha
Helix 76
76
E
449 456Right-handed alpha
Helix 77
77
E
470 475Right-handed alpha
Helix 78
78
E
479 483Right-handed 310
Helix 79
79
E
488 498Right-handed alpha
Helix 80
80
E
514 528Right-handed alpha
Helix 81
81
E
545 561Right-handed alpha
Helix 82
82
F
5 16Right-handed alpha
Helix 83
83
F
29 38Right-handed alpha
Helix 84
84
F
49 65Right-handed alpha
Helix 85
85
F
76 90Right-handed alpha
Helix 86
86
F
102 106Right-handed 310
Helix 87
87
F
122 130Right-handed alpha
Helix 88
88
F
140 142Right-handed 310
Helix 89
89
F
143 159Right-handed alpha
Helix 90
90
F
181 186Right-handed alpha
Helix 91
91
F
191 207Right-handed alpha
Helix 92
92
F
225 237Right-handed alpha
Helix 93
93
F
245 247Right-handed 310
Helix 94
94
F
262 266Right-handed 310
Helix 95
95
F
269 277Right-handed alpha
Helix 96
96
F
300 302Right-handed 310
Helix 97
97
F
323 335Right-handed alpha
Helix 98
98
F
339 348Right-handed alpha
Helix 99
99
F
366 376Right-handed alpha
Helix 100
100
F
389 397Right-handed alpha
Helix 101
101
F
417 429Right-handed alpha
Helix 102
102
F
440 447Right-handed alpha
Helix 103
103
F
449 456Right-handed alpha
Helix 104
104
F
470 475Right-handed alpha
Helix 105
105
F
479 483Right-handed 310
Helix 106
106
F
488 498Right-handed alpha
Helix 107
107
F
514 528Right-handed alpha
Helix 108
108
F
545 561Right-handed alpha
Helix 109
109
V
5 16Right-handed alpha
Helix 110
110
V
29 38Right-handed alpha
Helix 111
111
V
49 65Right-handed alpha
Helix 112
112
V
76 90Right-handed alpha
Helix 113
113
V
102 106Right-handed 310
Helix 114
114
V
122 130Right-handed alpha
Helix 115
115
V
140 142Right-handed 310
Helix 116
116
V
143 159Right-handed alpha
Helix 117
117
V
181 186Right-handed alpha
Helix 118
118
V
191 207Right-handed alpha
Helix 119
119
V
225 237Right-handed alpha
Helix 120
120
V
245 247Right-handed 310
Helix 121
121
V
262 266Right-handed 310
Helix 122
122
V
269 277Right-handed alpha
Helix 123
123
V
300 302Right-handed 310
Helix 124
124
V
323 335Right-handed alpha
Helix 125
125
V
339 348Right-handed alpha
Helix 126
126
V
366 376Right-handed alpha
Helix 127
127
V
389 397Right-handed alpha
Helix 128
128
V
417 429Right-handed alpha
Helix 129
129
V
440 447Right-handed alpha
Helix 130
130
V
449 456Right-handed alpha
Helix 131
131
V
470 475Right-handed alpha
Helix 132
132
V
479 483Right-handed 310
Helix 133
133
V
488 490Right-handed 310
Helix 134
134
V
491 498Right-handed alpha
Helix 135
135
V
514 528Right-handed alpha
Helix 136
136
V
545 561Right-handed alpha
Helix 137
137
X
5 16Right-handed alpha
Helix 138
138
X
29 38Right-handed alpha
Helix 139
139
X
49 65Right-handed alpha
Helix 140
140
X
76 90Right-handed alpha
Helix 141
141
X
102 106Right-handed 310
Helix 142
142
X
122 130Right-handed alpha
Helix 143
143
X
140 142Right-handed 310
Helix 144
144
X
143 159Right-handed alpha
Helix 145
145
X
181 186Right-handed alpha
Helix 146
146
X
191 207Right-handed alpha
Helix 147
147
X
225 237Right-handed alpha
Helix 148
148
X
245 247Right-handed 310
Helix 149
149
X
262 266Right-handed 310
Helix 150
150
X
269 277Right-handed alpha
Helix 151
151
X
300 302Right-handed 310
Helix 152
152
X
323 335Right-handed alpha
Helix 153
153
X
339 348Right-handed alpha
Helix 154
154
X
366 376Right-handed alpha
Helix 155
155
X
389 397Right-handed alpha
Helix 156
156
X
417 429Right-handed alpha
Helix 157
157
X
440 447Right-handed alpha
Helix 158
158
X
448 456Right-handed alpha
Helix 159
159
X
470 475Right-handed alpha
Helix 160
160
X
479 483Right-handed 310
Helix 161
161
X
488 498Right-handed alpha
Helix 162
162
X
514 528Right-handed alpha
Helix 163
163
X
545 561Right-handed alpha
Helix 164
164
Y
5 16Right-handed alpha
Helix 165
165
Y
29 38Right-handed alpha
Helix 166
166
Y
49 65Right-handed alpha
Helix 167
167
Y
76 90Right-handed alpha
Helix 168
168
Y
102 106Right-handed 310
Helix 169
169
Y
122 130Right-handed alpha
Helix 170
170
Y
140 142Right-handed 310
Helix 171
171
Y
143 159Right-handed alpha
Helix 172
172
Y
181 186Right-handed alpha
Helix 173
173
Y
191 207Right-handed alpha
Helix 174
174
Y
225 237Right-handed alpha
Helix 175
175
Y
245 247Right-handed 310
Helix 176
176
Y
262 266Right-handed 310
Helix 177
177
Y
269 277Right-handed alpha
Helix 178
178
Y
300 302Right-handed 310
Helix 179
179
Y
323 335Right-handed alpha
Helix 180
180
Y
339 348Right-handed alpha
Helix 181
181
Y
366 376Right-handed alpha
Helix 182
182
Y
389 397Right-handed alpha
Helix 183
183
Y
417 429Right-handed alpha
Helix 184
184
Y
440 447Right-handed alpha
Helix 185
185
Y
449 456Right-handed alpha
Helix 186
186
Y
470 475Right-handed alpha
Helix 187
187
Y
479 483Right-handed 310
Helix 188
188
Y
488 498Right-handed alpha
Helix 189
189
Y
514 528Right-handed alpha
Helix 190
190
Y
545 561Right-handed alpha
Helix 191
191
Z
5 16Right-handed alpha
Helix 192
192
Z
29 38Right-handed alpha
Helix 193
193
Z
49 65Right-handed alpha
Helix 194
194
Z
76 90Right-handed alpha
Helix 195
195
Z
102 106Right-handed 310
Helix 196
196
Z
122 130Right-handed alpha
Helix 197
197
Z
140 142Right-handed 310
Helix 198
198
Z
143 159Right-handed alpha
Helix 199
199
Z
181 186Right-handed alpha
Helix 200
200
Z
191 207Right-handed alpha
Helix 201
201
Z
225 237Right-handed alpha
Helix 202
202
Z
245 247Right-handed 310
Helix 203
203
Z
262 266Right-handed 310
Helix 204
204
Z
269 277Right-handed alpha
Helix 205
205
Z
300 302Right-handed 310
Helix 206
206
Z
323 333Right-handed alpha
Helix 207
207
Z
339 348Right-handed alpha
Helix 208
208
Z
366 376Right-handed alpha
Helix 209
209
Z
389 397Right-handed alpha
Helix 210
210
Z
417 429Right-handed alpha
Helix 211
211
Z
440 447Right-handed alpha
Helix 212
212
Z
449 456Right-handed alpha
Helix 213
213
Z
470 475Right-handed alpha
Helix 214
214
Z
479 483Right-handed 310
Helix 215
215
Z
488 498Right-handed alpha
Helix 216
216
Z
514 528Right-handed alpha
Helix 217
217
Z
545 561Right-handed alpha
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There are 32 sheets in PDB entry 2WVA. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE, EA, EB, EC, FA, FB, FC, VA, VB, VC, VD, VE, XA, XB, XC, XD, XE, YA, YB, YC, ZA, ZB, ZC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 4first strand
Strand 2
A
174 175anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
43 46first strand
Strand 2
A
20 23parallel
Strand 3
A
67 71parallel
Strand 4
A
94 100parallel
Strand 5
A
162 167parallel
Strand 6
A
135 138parallel
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There are 8 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
177 178first strand
Strand 2
F
317 320parallel
Strand 3
F
311 314anti-parallel
Strand 4
F
304 307anti-parallel
Strand 5
F
279 283parallel
Strand 6
F
212 216parallel
Strand 7
F
239 243parallel
Strand 8
F
257 261parallel
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There are 8 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
257 261first strand
Strand 2
A
239 243parallel
Strand 3
A
212 216parallel
Strand 4
A
279 283parallel
Strand 5
A
304 307parallel
Strand 6
A
311 314anti-parallel
Strand 7
A
317 320anti-parallel
Strand 8
F
177 178parallel
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There are 6 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
405 408first strand
Strand 2
A
382 386parallel
Strand 3
A
433 439parallel
Strand 4
A
461 466parallel
Strand 5
A
533 538parallel
Strand 6
A
508 512parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 4first strand
Strand 2
B
174 175anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
43 46first strand
Strand 2
B
20 23parallel
Strand 3
B
67 71parallel
Strand 4
B
94 100parallel
Strand 5
B
162 167parallel
Strand 6
B
134 138parallel
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There are 8 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
177 178first strand
Strand 2
E
317 320parallel
Strand 3
E
311 314anti-parallel
Strand 4
E
304 308anti-parallel
Strand 5
E
279 283parallel
Strand 6
E
212 216parallel
Strand 7
E
239 243parallel
Strand 8
E
257 261parallel
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There are 8 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
257 261first strand
Strand 2
B
239 243parallel
Strand 3
B
212 216parallel
Strand 4
B
279 283parallel
Strand 5
B
304 307parallel
Strand 6
B
311 314anti-parallel
Strand 7
B
317 320anti-parallel
Strand 8
E
177 178parallel
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There are 6 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
405 408first strand
Strand 2
B
382 386parallel
Strand 3
B
433 439parallel
Strand 4
B
461 466parallel
Strand 5
B
533 538parallel
Strand 6
B
508 512parallel
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There are 2 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
3 4first strand
Strand 2
E
174 175anti-parallel
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There are 6 strands in EB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
43 46first strand
Strand 2
E
20 23parallel
Strand 3
E
67 71parallel
Strand 4
E
94 100parallel
Strand 5
E
162 167parallel
Strand 6
E
135 138parallel
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There are 6 strands in EC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
405 407first strand
Strand 2
E
382 386parallel
Strand 3
E
433 439parallel
Strand 4
E
461 466parallel
Strand 5
E
533 538parallel
Strand 6
E
508 512parallel
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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
3 4first strand
Strand 2
F
174 175anti-parallel
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There are 6 strands in FB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
43 46first strand
Strand 2
F
20 23parallel
Strand 3
F
67 71parallel
Strand 4
F
94 100parallel
Strand 5
F
162 167parallel
Strand 6
F
134 138parallel
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There are 6 strands in FC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
405 408first strand
Strand 2
F
382 386parallel
Strand 3
F
433 439parallel
Strand 4
F
461 466parallel
Strand 5
F
533 538parallel
Strand 6
F
508 512parallel
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There are 2 strands in VA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
3 4first strand
Strand 2
V
174 175anti-parallel
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There are 6 strands in VB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
43 46first strand
Strand 2
V
20 23parallel
Strand 3
V
67 71parallel
Strand 4
V
94 100parallel
Strand 5
V
162 167parallel
Strand 6
V
135 138parallel
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There are 8 strands in VC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
177 178first strand
Strand 2
Y
317 320parallel
Strand 3
Y
311 314anti-parallel
Strand 4
Y
304 307anti-parallel
Strand 5
Y
279 283parallel
Strand 6
Y
212 216parallel
Strand 7
Y
239 243parallel
Strand 8
Y
257 261parallel
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There are 8 strands in VD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
257 261first strand
Strand 2
V
239 243parallel
Strand 3
V
212 216parallel
Strand 4
V
279 283parallel
Strand 5
V
304 307parallel
Strand 6
V
311 314anti-parallel
Strand 7
V
317 320anti-parallel
Strand 8
Y
177 178parallel
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There are 6 strands in VE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
405 407first strand
Strand 2
V
382 386parallel
Strand 3
V
433 439parallel
Strand 4
V
461 466parallel
Strand 5
V
533 538parallel
Strand 6
V
508 512parallel
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There are 2 strands in XA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
3 4first strand
Strand 2
X
174 175anti-parallel
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There are 6 strands in XB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
43 46first strand
Strand 2
X
20 23parallel
Strand 3
X
67 71parallel
Strand 4
X
94 100parallel
Strand 5
X
162 167parallel
Strand 6
X
135 138parallel
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There are 8 strands in XC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
177 178first strand
Strand 2
Z
317 320parallel
Strand 3
Z
311 314anti-parallel
Strand 4
Z
304 307anti-parallel
Strand 5
Z
279 283parallel
Strand 6
Z
212 216parallel
Strand 7
Z
239 243parallel
Strand 8
Z
257 261parallel
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There are 8 strands in XD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
257 261first strand
Strand 2
X
239 243parallel
Strand 3
X
212 216parallel
Strand 4
X
279 283parallel
Strand 5
X
304 307parallel
Strand 6
X
311 314anti-parallel
Strand 7
X
317 320anti-parallel
Strand 8
Z
177 178parallel
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There are 6 strands in XE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
X
405 407first strand
Strand 2
X
382 386parallel
Strand 3
X
433 439parallel
Strand 4
X
461 466parallel
Strand 5
X
533 538parallel
Strand 6
X
508 512parallel
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There are 2 strands in YA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
3 4first strand
Strand 2
Y
174 175anti-parallel
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There are 6 strands in YB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
43 46first strand
Strand 2
Y
20 23parallel
Strand 3
Y
67 71parallel
Strand 4
Y
94 100parallel
Strand 5
Y
162 167parallel
Strand 6
Y
134 138parallel
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There are 6 strands in YC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Y
405 407first strand
Strand 2
Y
382 386parallel
Strand 3
Y
433 439parallel
Strand 4
Y
461 466parallel
Strand 5
Y
533 538parallel
Strand 6
Y
508 512parallel
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There are 2 strands in ZA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Z
3 4first strand
Strand 2
Z
174 175anti-parallel
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There are 6 strands in ZB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Z
43 46first strand
Strand 2
Z
20 23parallel
Strand 3
Z
67 71parallel
Strand 4
Z
94 100parallel
Strand 5
Z
162 167parallel
Strand 6
Z
135 138parallel
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There are 6 strands in ZC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Z
405 408first strand
Strand 2
Z
382 386parallel
Strand 3
Z
433 439parallel
Strand 4
Z
461 466parallel
Strand 5
Z
533 538parallel
Strand 6
Z
508 512parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il