Analysis of interatomic Contacts of Structural Units in PDB entry:
2WVX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WVX entry

There are 4 chains in PDB entry 2WVX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 20	GLU 755
B	LYS 20	LEU 756
C	LYS 20	GLU 755
D	LYS 20	GLU 755

There are105 helices in PDB entry 2WVX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	22	26	Right-handed 310
Helix 2	2	A	116	118	Right-handed 310
Helix 3	3	A	176	178	Right-handed 310
Helix 4	4	A	255	263	Right-handed alpha
Helix 5	5	A	264	267	Right-handed 310
Helix 6	6	A	270	287	Right-handed alpha
Helix 7	7	A	295	309	Right-handed alpha
Helix 8	8	A	346	350	Right-handed alpha
Helix 9	9	A	352	361	Right-handed alpha
Helix 10	10	A	361	380	Right-handed alpha
Helix 11	11	A	398	409	Right-handed alpha
Helix 12	12	A	415	428	Right-handed alpha
Helix 13	13	A	441	449	Right-handed alpha
Helix 14	14	A	459	481	Right-handed alpha
Helix 15	15	A	484	495	Right-handed alpha
Helix 16	16	A	496	500	Right-handed 310
Helix 17	17	A	535	540	Right-handed alpha
Helix 18	18	A	546	554	Right-handed alpha
Helix 19	19	A	556	570	Right-handed alpha
Helix 20	20	A	583	591	Right-handed alpha
Helix 21	21	A	601	605	Right-handed 310
Helix 22	22	A	606	615	Right-handed 310
Helix 23	23	A	616	631	Right-handed alpha
Helix 24	24	A	646	658	Right-handed alpha
Helix 25	25	A	720	726	Right-handed alpha
Helix 26	26	A	744	748	Right-handed 310
Helix 27	27	B	22	26	Right-handed 310
Helix 28	28	B	116	118	Right-handed 310
Helix 29	29	B	176	178	Right-handed 310
Helix 30	30	B	255	263	Right-handed alpha
Helix 31	31	B	264	267	Right-handed 310
Helix 32	32	B	270	287	Right-handed alpha
Helix 33	33	B	295	309	Right-handed alpha
Helix 34	34	B	346	350	Right-handed alpha
Helix 35	35	B	352	361	Right-handed alpha
Helix 36	36	B	361	380	Right-handed alpha
Helix 37	37	B	398	409	Right-handed alpha
Helix 38	38	B	415	427	Right-handed alpha
Helix 39	39	B	441	449	Right-handed alpha
Helix 40	40	B	459	481	Right-handed alpha
Helix 41	41	B	484	495	Right-handed alpha
Helix 42	42	B	496	500	Right-handed 310
Helix 43	43	B	535	540	Right-handed alpha
Helix 44	44	B	546	555	Right-handed alpha
Helix 45	45	B	556	570	Right-handed alpha
Helix 46	46	B	583	591	Right-handed alpha
Helix 47	47	B	601	605	Right-handed 310
Helix 48	48	B	606	615	Right-handed 310
Helix 49	49	B	616	631	Right-handed alpha
Helix 50	50	B	646	658	Right-handed alpha
Helix 51	51	B	720	726	Right-handed alpha
Helix 52	52	B	744	748	Right-handed 310
Helix 53	53	B	751	756	Right-handed alpha
Helix 54	54	C	22	26	Right-handed 310
Helix 55	55	C	116	118	Right-handed 310
Helix 56	56	C	176	178	Right-handed 310
Helix 57	57	C	255	263	Right-handed alpha
Helix 58	58	C	264	267	Right-handed 310
Helix 59	59	C	270	287	Right-handed alpha
Helix 60	60	C	295	309	Right-handed alpha
Helix 61	61	C	346	350	Right-handed alpha
Helix 62	62	C	352	361	Right-handed alpha
Helix 63	63	C	361	380	Right-handed alpha
Helix 64	64	C	398	409	Right-handed alpha
Helix 65	65	C	415	427	Right-handed alpha
Helix 66	66	C	441	449	Right-handed alpha
Helix 67	67	C	459	481	Right-handed alpha
Helix 68	68	C	484	495	Right-handed alpha
Helix 69	69	C	496	500	Right-handed 310
Helix 70	70	C	535	540	Right-handed alpha
Helix 71	71	C	546	554	Right-handed alpha
Helix 72	72	C	556	570	Right-handed alpha
Helix 73	73	C	583	592	Right-handed alpha
Helix 74	74	C	601	605	Right-handed 310
Helix 75	75	C	606	615	Right-handed 310
Helix 76	76	C	616	631	Right-handed alpha
Helix 77	77	C	646	658	Right-handed alpha
Helix 78	78	C	720	726	Right-handed alpha
Helix 79	79	C	744	748	Right-handed 310
Helix 80	80	D	22	26	Right-handed 310
Helix 81	81	D	116	118	Right-handed 310
Helix 82	82	D	176	178	Right-handed 310
Helix 83	83	D	255	263	Right-handed alpha
Helix 84	84	D	264	267	Right-handed 310
Helix 85	85	D	270	287	Right-handed alpha
Helix 86	86	D	295	309	Right-handed alpha
Helix 87	87	D	346	350	Right-handed alpha
Helix 88	88	D	352	361	Right-handed alpha
Helix 89	89	D	361	380	Right-handed alpha
Helix 90	90	D	398	409	Right-handed alpha
Helix 91	91	D	415	428	Right-handed alpha
Helix 92	92	D	441	449	Right-handed alpha
Helix 93	93	D	459	481	Right-handed alpha
Helix 94	94	D	484	495	Right-handed alpha
Helix 95	95	D	496	500	Right-handed 310
Helix 96	96	D	535	540	Right-handed alpha
Helix 97	97	D	546	554	Right-handed alpha
Helix 98	98	D	556	570	Right-handed alpha
Helix 99	99	D	583	592	Right-handed alpha
Helix 100	100	D	601	605	Right-handed 310
Helix 101	101	D	606	615	Right-handed 310
Helix 102	102	D	616	631	Right-handed alpha
Helix 103	103	D	646	658	Right-handed alpha
Helix 104	104	D	720	726	Right-handed alpha
Helix 105	105	D	744	748	Right-handed 310

There are 36 sheets in PDB entry 2WVX. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, BA, BB, BC, BD, BE, BF, BG, BH, BI, CA, CB, CC, CD, CE, CF, CG, CH, CI, A, DB, C, DD, DE, DF, G, DH, DI,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	59	first strand
Strand 2	A	78	82	anti-parallel
Strand 3	A	95	101	anti-parallel
Strand 4	A	156	164	anti-parallel
Strand 5	A	231	239	anti-parallel
Strand 6	A	210	215	anti-parallel
Strand 7	A	218	221	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	76	first strand
Strand 2	A	113	114	anti-parallel

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There are 9 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	120	123	first strand
Strand 2	A	126	131	anti-parallel
Strand 3	A	136	142	anti-parallel
Strand 4	A	146	153	anti-parallel
Strand 5	A	243	252	anti-parallel
Strand 6	A	198	204	anti-parallel
Strand 7	A	180	185	anti-parallel
Strand 8	A	170	175	anti-parallel
Strand 9	A	225	228	anti-parallel

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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	289	292	first strand
Strand 2	A	678	682	anti-parallel
Strand 3	A	688	692	anti-parallel
Strand 4	A	727	734	parallel
Strand 5	A	702	708	anti-parallel
Strand 6	A	711	712	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	314	315	first strand
Strand 2	A	341	342	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	319	first strand
Strand 2	A	325	328	anti-parallel
Strand 3	A	335	337	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	345	first strand
Strand 2	A	385	386	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	502	503	first strand
Strand 2	A	508	509	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	660	first strand
Strand 2	A	668	671	anti-parallel
Strand 3	A	717	719	anti-parallel

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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	59	first strand
Strand 2	B	78	82	anti-parallel
Strand 3	B	95	101	anti-parallel
Strand 4	B	156	164	anti-parallel
Strand 5	B	231	239	anti-parallel
Strand 6	B	210	215	anti-parallel
Strand 7	B	218	221	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	75	76	first strand
Strand 2	B	113	114	anti-parallel

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There are 9 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	120	123	first strand
Strand 2	B	126	131	anti-parallel
Strand 3	B	136	142	anti-parallel
Strand 4	B	146	153	anti-parallel
Strand 5	B	243	252	anti-parallel
Strand 6	B	198	204	anti-parallel
Strand 7	B	180	185	anti-parallel
Strand 8	B	170	175	anti-parallel
Strand 9	B	225	228	anti-parallel

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There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	289	292	first strand
Strand 2	B	678	682	anti-parallel
Strand 3	B	688	692	anti-parallel
Strand 4	B	727	734	parallel
Strand 5	B	702	708	anti-parallel
Strand 6	B	711	712	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	314	315	first strand
Strand 2	B	341	342	anti-parallel

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There are 3 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	318	319	first strand
Strand 2	B	325	328	anti-parallel
Strand 3	B	335	337	anti-parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	345	first strand
Strand 2	B	385	386	anti-parallel

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There are 2 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	502	503	first strand
Strand 2	B	508	509	anti-parallel

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There are 3 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	660	first strand
Strand 2	B	668	671	anti-parallel
Strand 3	B	717	719	anti-parallel

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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	59	first strand
Strand 2	C	78	82	anti-parallel
Strand 3	C	95	101	anti-parallel
Strand 4	C	156	164	anti-parallel
Strand 5	C	231	239	anti-parallel
Strand 6	C	210	215	anti-parallel
Strand 7	C	218	221	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	76	first strand
Strand 2	C	113	114	anti-parallel

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There are 9 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	120	123	first strand
Strand 2	C	126	131	anti-parallel
Strand 3	C	136	142	anti-parallel
Strand 4	C	146	153	anti-parallel
Strand 5	C	243	252	anti-parallel
Strand 6	C	198	204	anti-parallel
Strand 7	C	180	185	anti-parallel
Strand 8	C	170	175	anti-parallel
Strand 9	C	225	228	anti-parallel

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There are 6 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	292	first strand
Strand 2	C	678	682	anti-parallel
Strand 3	C	688	692	anti-parallel
Strand 4	C	727	734	parallel
Strand 5	C	702	708	anti-parallel
Strand 6	C	711	712	anti-parallel

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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	314	315	first strand
Strand 2	C	341	342	anti-parallel

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There are 3 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	319	first strand
Strand 2	C	325	328	anti-parallel
Strand 3	C	335	337	anti-parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	344	345	first strand
Strand 2	C	385	386	anti-parallel

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There are 2 strands in CH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	502	503	first strand
Strand 2	C	508	509	anti-parallel

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There are 3 strands in CI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	659	660	first strand
Strand 2	C	668	671	anti-parallel
Strand 3	C	717	719	anti-parallel

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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	59	first strand
Strand 2	D	78	82	anti-parallel
Strand 3	D	95	101	anti-parallel
Strand 4	D	156	164	anti-parallel
Strand 5	D	231	239	anti-parallel
Strand 6	D	210	215	anti-parallel
Strand 7	D	218	221	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	75	76	first strand
Strand 2	D	113	114	anti-parallel

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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	120	122	first strand
Strand 2	D	127	131	anti-parallel
Strand 3	D	136	142	anti-parallel
Strand 4	D	146	153	anti-parallel
Strand 5	D	243	252	anti-parallel
Strand 6	D	198	204	anti-parallel
Strand 7	D	180	185	anti-parallel
Strand 8	D	170	175	anti-parallel
Strand 9	D	225	228	anti-parallel

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There are 6 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	289	292	first strand
Strand 2	D	678	682	anti-parallel
Strand 3	D	688	692	anti-parallel
Strand 4	D	727	734	parallel
Strand 5	D	702	708	anti-parallel
Strand 6	D	711	712	anti-parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	314	315	first strand
Strand 2	D	341	342	anti-parallel

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There are 3 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	319	first strand
Strand 2	D	325	328	anti-parallel
Strand 3	D	335	337	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	344	345	first strand
Strand 2	D	385	386	anti-parallel

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There are 2 strands in DH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	502	503	first strand
Strand 2	D	508	509	anti-parallel

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There are 3 strands in DI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	659	660	first strand
Strand 2	D	668	671	anti-parallel
Strand 3	D	717	719	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WVX

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WVX