Analysis of interatomic Contacts of Structural Units in PDB entry:
2WW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WW8 entry

There is 1 chain in PDB entry 2WW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 46LYS 860
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2WW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
234 238Right-handed 310
Helix 2
2
A
240 245Right-handed alpha
Helix 3
3
A
246 264Right-handed alpha
Helix 4
4
A
327 338Right-handed alpha
Helix 5
5
A
349 355Right-handed 310
Helix 6
6
A
358 374Right-handed alpha
Helix 7
7
A
406 417Right-handed alpha
Helix 8
8
A
425 428Right-handed 310
Helix 9
9
A
436 440Right-handed 310
Helix 10
10
A
468 470Right-handed 310
Helix 11
11
A
471 478Right-handed alpha
Helix 12
12
A
498 500Right-handed 310
Helix 13
13
A
515 527Right-handed alpha
Helix 14
14
A
528 531Right-handed 310
Helix 15
15
A
548 559Right-handed alpha
Helix 16
16
A
562 564Right-handed 310
Helix 17
17
A
571 573Right-handed 310
Helix 18
18
A
574 584Right-handed alpha
Helix 19
19
A
617 619Right-handed 310
Helix 20
20
A
644 648Right-handed 310
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There are 18 sheets in PDB entry 2WW8. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 94first strand
Strand 2
A
48 55anti-parallel
Strand 3
A
724 730parallel
Strand 4
A
135 137anti-parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
66 71anti-parallel
Strand 3
A
97 105anti-parallel
Strand 4
A
117 121anti-parallel
Strand 5
A
127 129anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
157 162anti-parallel
Strand 3
A
174 178anti-parallel
Strand 4
A
717 718anti-parallel
Strand 5
A
692 693anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
171 172anti-parallel
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There are 5 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
187 198anti-parallel
Strand 3
A
203 211anti-parallel
Strand 4
A
673 682anti-parallel
Strand 5
A
606 608anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
673 682anti-parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
587 591anti-parallel
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There are 6 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 325first strand
Strand 2
A
269 275anti-parallel
Strand 3
A
225 232parallel
Strand 4
A
379 386parallel
Strand 5
A
533 539parallel
Strand 6
A
566 569parallel
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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 288first strand
Strand 2
A
311 315anti-parallel
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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
291 292anti-parallel
Strand 3
A
495 496anti-parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 393first strand
Strand 2
A
442 443anti-parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
461 462anti-parallel
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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 467first strand
Strand 2
A
489 493anti-parallel
Strand 3
A
483 485anti-parallel
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There are 5 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
651 655first strand
Strand 2
A
660 668anti-parallel
Strand 3
A
593 601anti-parallel
Strand 4
A
699 701anti-parallel
Strand 5
A
711 712anti-parallel
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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
630 632first strand
Strand 2
A
635 637anti-parallel
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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
788 794first strand
Strand 2
A
736 744anti-parallel
Strand 3
A
849 854parallel
Strand 4
A
841 846anti-parallel
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There are 5 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
769 770first strand
Strand 2
A
755 761anti-parallel
Strand 3
A
797 805anti-parallel
Strand 4
A
814 824anti-parallel
Strand 5
A
827 833anti-parallel
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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
769 770first strand
Strand 2
A
781 782anti-parallel
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