Analysis of interatomic Contacts of Structural Units in PDB entry:
2WWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WWE entry

There is 1 chain in PDB entry 2WWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN -6GLU 1306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 2WWE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1237 1252Right-handed alpha
Helix 2
2
A
1265 1271Right-handed alpha
Helix 3
3
A
1272 1287Right-handed alpha
Helix 4
4
A
1290 1295Right-handed alpha
Helix 5
5
A
1296 1305Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2WWE.

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1204 1213first strand
Strand 2
A
1219 1226anti-parallel
Strand 3
A
1230 1236anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il