Analysis of interatomic Contacts of Structural Units in PDB entry:
2WWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WWY entry

There are 8 chains in PDB entry 2WWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 63LYS 592
B
 SER 64SER 593
O
 C 1 A 5
P
 A 1 C 13
Q
 T 7 T 26
R
 G 2 T 4
S
 A 1 C 12
T
 G 9 T 26
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 54 helices in PDB entry 2WWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 69Right-handed 310
Helix 2
2
A
75 87Right-handed alpha
Helix 3
3
A
95 105Right-handed alpha
Helix 4
4
A
120 125Right-handed alpha
Helix 5
5
A
126 129Right-handed 310
Helix 6
6
A
140 153Right-handed alpha
Helix 7
7
A
168 179Right-handed alpha
Helix 8
8
A
191 196Right-handed alpha
Helix 9
9
A
197 210Right-handed alpha
Helix 10
10
A
220 224Right-handed 310
Helix 11
11
A
225 229Right-handed 310
Helix 12
12
A
232 238Right-handed 310
Helix 13
13
A
239 245Right-handed alpha
Helix 14
14
A
258 269Right-handed alpha
Helix 15
15
A
296 309Right-handed alpha
Helix 16
16
A
323 336Right-handed alpha
Helix 17
17
A
349 362Right-handed alpha
Helix 18
18
A
394 403Right-handed alpha
Helix 19
19
A
419 430Right-handed alpha
Helix 20
20
A
435 449Right-handed alpha
Helix 21
21
A
453 463Right-handed alpha
Helix 22
22
A
475 480Right-handed alpha
Helix 23
23
A
489 506Right-handed alpha
Helix 24
24
A
511 520Right-handed alpha
Helix 25
25
A
524 528Right-handed 310
Helix 26
26
A
538 552Right-handed alpha
Helix 27
27
A
574 581Right-handed 310
Helix 28
28
B
64 69Right-handed 310
Helix 29
29
B
75 87Right-handed alpha
Helix 30
30
B
95 105Right-handed alpha
Helix 31
31
B
120 125Right-handed alpha
Helix 32
32
B
126 129Right-handed 310
Helix 33
33
B
140 155Right-handed alpha
Helix 34
34
B
166 179Right-handed alpha
Helix 35
35
B
190 197Right-handed alpha
Helix 36
36
B
197 211Right-handed alpha
Helix 37
37
B
220 225Right-handed 310
Helix 38
38
B
225 229Right-handed 310
Helix 39
39
B
232 238Right-handed 310
Helix 40
40
B
239 245Right-handed alpha
Helix 41
41
B
258 269Right-handed alpha
Helix 42
42
B
296 310Right-handed alpha
Helix 43
43
B
323 336Right-handed alpha
Helix 44
44
B
349 362Right-handed alpha
Helix 45
45
B
394 403Right-handed alpha
Helix 46
46
B
419 430Right-handed alpha
Helix 47
47
B
435 449Right-handed alpha
Helix 48
48
B
453 462Right-handed alpha
Helix 49
49
B
475 480Right-handed alpha
Helix 50
50
B
489 506Right-handed alpha
Helix 51
51
B
511 520Right-handed alpha
Helix 52
52
B
524 528Right-handed 310
Helix 53
53
B
538 552Right-handed alpha
Helix 54
54
B
574 581Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 2WWY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 160first strand
Strand 2
A
186 189parallel
Strand 3
A
133 137parallel
Strand 4
A
213 218parallel
Strand 5
A
249 254parallel
Strand 6
A
109 112parallel
Strand 7
A
275 278parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 292first strand
Strand 2
A
412 418parallel
Strand 3
A
383 388parallel
Strand 4
A
316 320parallel
Strand 5
A
367 370parallel
Strand 6
A
341 344parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 488first strand
Strand 2
A
587 591anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
555 561first strand
Strand 2
A
566 572anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 160first strand
Strand 2
B
186 189parallel
Strand 3
B
133 137parallel
Strand 4
B
213 218parallel
Strand 5
B
249 254parallel
Strand 6
B
109 112parallel
Strand 7
B
275 278parallel
Back to list of sheets
Back to top of page

There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
286 292first strand
Strand 2
B
412 418parallel
Strand 3
B
385 388parallel
Strand 4
B
317 320parallel
Strand 5
B
367 370parallel
Strand 6
B
341 344parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
484 488first strand
Strand 2
B
587 591anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
555 561first strand
Strand 2
B
566 572anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il