Analysis of interatomic Contacts of Structural Units in PDB entry:
2WXY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WXY entry

There is 1 chain in PDB entry 2WXY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ARG 2GLN 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2WXY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
7 10Right-handed 310
Helix 2
2
C
47 61Right-handed alpha
Helix 3
3
C
63 92Right-handed alpha
Helix 4
4
C
101 115Right-handed alpha
Helix 5
5
C
119 128Right-handed alpha
Helix 6
6
C
136 140Right-handed 310
Helix 7
7
C
142 159Right-handed alpha
Helix 8
8
C
187 195Right-handed alpha
Helix 9
9
C
210 227Right-handed alpha
Helix 10
10
C
316 318Right-handed 310
Helix 11
11
C
319 328Right-handed alpha
Helix 12
12
C
359 366Right-handed alpha
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There are 5 sheets in PDB entry 2WXY. Click on sheet of interest to get list of strands forming it: CA, CB, CC, CD, CE,

There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
33 34first strand
Strand 2
C
185 186anti-parallel
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There are 8 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 100first strand
Strand 2
C
440 446anti-parallel
Strand 3
C
428 434anti-parallel
Strand 4
C
307 314anti-parallel
Strand 5
C
296 302anti-parallel
Strand 6
C
279 291anti-parallel
Strand 7
C
342 349anti-parallel
Strand 8
C
420 423anti-parallel
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There are 9 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 100first strand
Strand 2
C
440 446anti-parallel
Strand 3
C
428 434anti-parallel
Strand 4
C
307 314anti-parallel
Strand 5
C
296 302anti-parallel
Strand 6
C
279 291anti-parallel
Strand 7
C
243 260anti-parallel
Strand 8
C
392 403parallel
Strand 9
C
351 358anti-parallel
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There are 9 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 100first strand
Strand 2
C
440 446anti-parallel
Strand 3
C
428 434anti-parallel
Strand 4
C
307 314anti-parallel
Strand 5
C
296 302anti-parallel
Strand 6
C
279 291anti-parallel
Strand 7
C
243 260anti-parallel
Strand 8
C
169 179anti-parallel
Strand 9
C
200 204anti-parallel
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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
265 270first strand
Strand 2
C
273 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il