Analysis of interatomic Contacts of Structural Units in PDB entry:
2WY1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WY1 entry

There are 2 chains in PDB entry 2WY1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3GLN 450
B
 ILE 5GLN 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2WY1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 11Right-handed 310
Helix 2
2
A
14 20Right-handed alpha
Helix 3
3
A
47 60Right-handed alpha
Helix 4
4
A
63 92Right-handed alpha
Helix 5
5
A
101 115Right-handed alpha
Helix 6
6
A
117 129Right-handed alpha
Helix 7
7
A
142 158Right-handed alpha
Helix 8
8
A
187 191Right-handed alpha
Helix 9
9
A
210 226Right-handed alpha
Helix 10
10
A
316 318Right-handed 310
Helix 11
11
A
319 328Right-handed alpha
Helix 12
12
A
359 366Right-handed alpha
Helix 13
13
A
378 381Right-handed 310
Helix 14
14
B
8 11Right-handed 310
Helix 15
15
B
14 21Right-handed alpha
Helix 16
16
B
47 60Right-handed alpha
Helix 17
17
B
63 92Right-handed alpha
Helix 18
18
B
101 115Right-handed alpha
Helix 19
19
B
117 129Right-handed alpha
Helix 20
20
B
142 158Right-handed alpha
Helix 21
21
B
187 191Right-handed alpha
Helix 22
22
B
210 226Right-handed alpha
Helix 23
23
B
316 318Right-handed 310
Helix 24
24
B
319 328Right-handed alpha
Helix 25
25
B
359 366Right-handed alpha
Helix 26
26
B
378 381Right-handed 310
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There are 10 sheets in PDB entry 2WY1. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, BA, BB, BC, BD, BE,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
185 186anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
440 446anti-parallel
Strand 3
A
428 433anti-parallel
Strand 4
A
308 314anti-parallel
Strand 5
A
296 302anti-parallel
Strand 6
A
284 290anti-parallel
Strand 7
A
342 344anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 204first strand
Strand 2
A
169 179parallel
Strand 3
A
244 255anti-parallel
Strand 4
A
392 401parallel
Strand 5
A
351 358anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 260first strand
Strand 2
A
279 282anti-parallel
Strand 3
A
347 349anti-parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 267first strand
Strand 2
A
275 277anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 34first strand
Strand 2
B
185 186anti-parallel
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There are 7 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
440 446anti-parallel
Strand 3
B
428 433anti-parallel
Strand 4
B
308 314anti-parallel
Strand 5
B
296 302anti-parallel
Strand 6
B
284 290anti-parallel
Strand 7
B
342 344anti-parallel
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There are 5 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 204first strand
Strand 2
B
169 179parallel
Strand 3
B
244 255anti-parallel
Strand 4
B
392 401parallel
Strand 5
B
351 358anti-parallel
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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 260first strand
Strand 2
B
279 282anti-parallel
Strand 3
B
347 349anti-parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 267first strand
Strand 2
B
275 277anti-parallel
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