Analysis of interatomic Contacts of Structural Units in PDB entry:
2WYC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WYC entry

There are 2 chains in PDB entry 2WYC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6LYS 169
B
 SER 1GLU 546
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2WYC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 18Right-handed 310
Helix 2
2
A
26 54Right-handed alpha
Helix 3
3
A
56 62Right-handed alpha
Helix 4
4
A
72 84Right-handed alpha
Helix 5
5
A
85 95Right-handed alpha
Helix 6
6
A
97 118Right-handed alpha
Helix 7
7
A
135 148Right-handed alpha
Helix 8
8
A
149 154Right-handed 310
Helix 9
9
A
155 162Right-handed alpha
Helix 10
10
B
27 31Right-handed 310
Helix 11
11
B
152 155Right-handed 310
Helix 12
12
B
157 167Right-handed alpha
Helix 13
13
B
170 182Right-handed alpha
Helix 14
14
B
210 212Right-handed 310
Helix 15
15
B
213 218Right-handed alpha
Helix 16
16
B
219 224Right-handed alpha
Helix 17
17
B
234 238Right-handed 310
Helix 18
18
B
252 256Right-handed 310
Helix 19
19
B
295 306Right-handed alpha
Helix 20
20
B
312 322Right-handed alpha
Helix 21
21
B
326 342Right-handed alpha
Helix 22
22
B
345 358Right-handed alpha
Helix 23
23
B
368 381Right-handed alpha
Helix 24
24
B
407 428Right-handed alpha
Helix 25
25
B
435 439Right-handed alpha
Helix 26
26
B
455 459Right-handed 310
Helix 27
27
B
512 520Right-handed alpha
Helix 28
28
B
529 536Right-handed alpha
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There are 10 sheets in PDB entry 2WYC. Click on sheet of interest to get list of strands forming it: BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ,

There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 261first strand
Strand 2
B
198 201anti-parallel
Strand 3
B
187 193anti-parallel
Strand 4
B
64 70anti-parallel
Strand 5
B
58 60anti-parallel
Strand 6
B
43 49anti-parallel
Strand 7
B
33 39anti-parallel
Strand 8
A
19 23parallel
Strand 9
A
8 15anti-parallel
Strand 10
B
540 546anti-parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 267first strand
Strand 2
B
2 6anti-parallel
Strand 3
B
17 21anti-parallel
Strand 4
B
481 486anti-parallel
Strand 5
B
493 498anti-parallel
Strand 6
B
524 525anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
472 479parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
447 450first strand
Strand 2
B
440 444anti-parallel
Strand 3
B
472 479parallel
Strand 4
B
464 469anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
447 450first strand
Strand 2
B
440 444anti-parallel
Strand 3
B
472 479parallel
Strand 4
B
23 25parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
464 469first strand
Strand 2
B
472 479anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 99first strand
Strand 2
B
87 93anti-parallel
Strand 3
B
76 84anti-parallel
Strand 4
B
229 231parallel
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There are 7 strands in BH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 99first strand
Strand 2
B
87 93anti-parallel
Strand 3
B
76 84anti-parallel
Strand 4
B
144 150anti-parallel
Strand 5
B
129 132anti-parallel
Strand 6
B
116 126anti-parallel
Strand 7
B
101 110anti-parallel
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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 231first strand
Strand 2
B
76 84parallel
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There are 2 strands in BJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 389first strand
Strand 2
B
401 403anti-parallel
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