Analysis of interatomic Contacts of Structural Units in PDB entry:
2WYN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WYN entry

There are 4 chains in PDB entry 2WYN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 35	ARG 546
B	GLU 32	ARG 546
C	GLN 38	ARG 546
D	THR 33	ARG 546

There are105 helices in PDB entry 2WYN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	39	44	Right-handed alpha
Helix 2	2	A	45	54	Right-handed alpha
Helix 3	3	A	60	65	Right-handed alpha
Helix 4	4	A	71	84	Right-handed alpha
Helix 5	5	A	89	97	Right-handed alpha
Helix 6	6	A	114	126	Right-handed alpha
Helix 7	7	A	157	171	Right-handed alpha
Helix 8	8	A	173	192	Right-handed alpha
Helix 9	9	A	200	203	Right-handed 310
Helix 10	10	A	210	223	Right-handed alpha
Helix 11	11	A	224	242	Right-handed alpha
Helix 12	12	A	244	248	Right-handed 310
Helix 13	13	A	277	279	Right-handed 310
Helix 14	14	A	280	290	Right-handed alpha
Helix 15	15	A	295	309	Right-handed alpha
Helix 16	16	A	314	317	Right-handed 310
Helix 17	17	A	323	326	Right-handed 310
Helix 18	18	A	328	330	Right-handed 310
Helix 19	19	A	334	355	Right-handed alpha
Helix 20	20	A	357	379	Right-handed alpha
Helix 21	21	A	403	405	Right-handed 310
Helix 22	22	A	406	411	Right-handed alpha
Helix 23	23	A	415	430	Right-handed alpha
Helix 24	24	A	453	467	Right-handed alpha
Helix 25	25	A	469	492	Right-handed alpha
Helix 26	26	A	518	533	Right-handed alpha
Helix 27	27	B	39	45	Right-handed alpha
Helix 28	28	B	45	54	Right-handed alpha
Helix 29	29	B	59	65	Right-handed alpha
Helix 30	30	B	71	84	Right-handed alpha
Helix 31	31	B	89	97	Right-handed alpha
Helix 32	32	B	114	123	Right-handed alpha
Helix 33	33	B	157	171	Right-handed alpha
Helix 34	34	B	173	192	Right-handed alpha
Helix 35	35	B	200	203	Right-handed 310
Helix 36	36	B	210	223	Right-handed alpha
Helix 37	37	B	224	242	Right-handed alpha
Helix 38	38	B	244	248	Right-handed 310
Helix 39	39	B	277	279	Right-handed 310
Helix 40	40	B	280	290	Right-handed alpha
Helix 41	41	B	295	310	Right-handed alpha
Helix 42	42	B	314	317	Right-handed 310
Helix 43	43	B	323	326	Right-handed 310
Helix 44	44	B	328	330	Right-handed 310
Helix 45	45	B	334	355	Right-handed alpha
Helix 46	46	B	357	379	Right-handed alpha
Helix 47	47	B	403	405	Right-handed 310
Helix 48	48	B	406	411	Right-handed alpha
Helix 49	49	B	415	430	Right-handed alpha
Helix 50	50	B	453	467	Right-handed alpha
Helix 51	51	B	469	492	Right-handed alpha
Helix 52	52	B	518	533	Right-handed alpha
Helix 53	53	C	39	45	Right-handed alpha
Helix 54	54	C	45	54	Right-handed alpha
Helix 55	55	C	59	65	Right-handed alpha
Helix 56	56	C	71	83	Right-handed alpha
Helix 57	57	C	89	97	Right-handed alpha
Helix 58	58	C	114	122	Right-handed alpha
Helix 59	59	C	157	171	Right-handed alpha
Helix 60	60	C	173	192	Right-handed alpha
Helix 61	61	C	200	203	Right-handed 310
Helix 62	62	C	210	223	Right-handed alpha
Helix 63	63	C	223	242	Right-handed alpha
Helix 64	64	C	244	248	Right-handed 310
Helix 65	65	C	277	279	Right-handed 310
Helix 66	66	C	280	290	Right-handed alpha
Helix 67	67	C	295	309	Right-handed alpha
Helix 68	68	C	314	317	Right-handed 310
Helix 69	69	C	323	326	Right-handed 310
Helix 70	70	C	328	330	Right-handed 310
Helix 71	71	C	334	355	Right-handed alpha
Helix 72	72	C	357	379	Right-handed alpha
Helix 73	73	C	403	405	Right-handed 310
Helix 74	74	C	406	411	Right-handed alpha
Helix 75	75	C	415	430	Right-handed alpha
Helix 76	76	C	453	466	Right-handed alpha
Helix 77	77	C	469	492	Right-handed alpha
Helix 78	78	C	518	533	Right-handed alpha
Helix 79	79	D	39	45	Right-handed alpha
Helix 80	80	D	45	54	Right-handed alpha
Helix 81	81	D	60	65	Right-handed alpha
Helix 82	82	D	71	84	Right-handed alpha
Helix 83	83	D	89	97	Right-handed alpha
Helix 84	84	D	114	123	Right-handed alpha
Helix 85	85	D	157	171	Right-handed alpha
Helix 86	86	D	173	192	Right-handed alpha
Helix 87	87	D	200	203	Right-handed 310
Helix 88	88	D	210	223	Right-handed alpha
Helix 89	89	D	224	230	Right-handed alpha
Helix 90	90	D	230	243	Right-handed alpha
Helix 91	91	D	244	248	Right-handed 310
Helix 92	92	D	277	279	Right-handed 310
Helix 93	93	D	280	290	Right-handed alpha
Helix 94	94	D	295	310	Right-handed alpha
Helix 95	95	D	314	317	Right-handed 310
Helix 96	96	D	323	326	Right-handed 310
Helix 97	97	D	328	330	Right-handed 310
Helix 98	98	D	334	355	Right-handed alpha
Helix 99	99	D	357	379	Right-handed alpha
Helix 100	100	D	403	405	Right-handed 310
Helix 101	101	D	406	411	Right-handed alpha
Helix 102	102	D	415	430	Right-handed alpha
Helix 103	103	D	454	467	Right-handed alpha
Helix 104	104	D	469	492	Right-handed alpha
Helix 105	105	D	518	533	Right-handed alpha

There are 28 sheets in PDB entry 2WYN. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG, CA, CB, CC, CD, CE, CF, CG, A, DB, C, DD, DE, DF, G,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	68	first strand
Strand 2	A	98	99	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	127	128	first strand
Strand 2	A	146	147	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	254	first strand
Strand 2	A	257	259	anti-parallel
Strand 3	A	265	267	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	332	333	first strand
Strand 2	A	390	391	anti-parallel
Strand 3	A	396	397	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	381	first strand
Strand 2	A	386	387	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	431	432	first strand
Strand 2	A	435	436	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	498	499	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	68	first strand
Strand 2	B	98	99	anti-parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	128	first strand
Strand 2	B	146	147	anti-parallel

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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	254	first strand
Strand 2	B	257	259	anti-parallel
Strand 3	B	265	267	anti-parallel

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There are 3 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	332	333	first strand
Strand 2	B	390	391	anti-parallel
Strand 3	B	396	397	anti-parallel

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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	381	first strand
Strand 2	B	386	387	anti-parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	431	432	first strand
Strand 2	B	435	436	anti-parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	498	499	anti-parallel

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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	68	first strand
Strand 2	C	98	99	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	127	128	first strand
Strand 2	C	146	147	anti-parallel

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There are 3 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	252	254	first strand
Strand 2	C	257	259	anti-parallel
Strand 3	C	265	267	anti-parallel

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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	332	333	first strand
Strand 2	C	390	391	anti-parallel
Strand 3	C	396	397	anti-parallel

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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	381	first strand
Strand 2	C	386	387	anti-parallel

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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	431	432	first strand
Strand 2	C	435	436	anti-parallel

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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	498	499	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	67	68	first strand
Strand 2	D	98	99	anti-parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	128	first strand
Strand 2	D	146	147	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	252	254	first strand
Strand 2	D	257	259	anti-parallel
Strand 3	D	265	267	anti-parallel

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There are 3 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	332	333	first strand
Strand 2	D	390	391	anti-parallel
Strand 3	D	396	397	anti-parallel

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There are 2 strands in DE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	380	381	first strand
Strand 2	D	386	387	anti-parallel

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There are 2 strands in DF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	431	432	first strand
Strand 2	D	435	436	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	453	first strand
Strand 2	D	497	499	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WYN

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WYN