Analysis of interatomic Contacts of Structural Units in PDB entry:
2WYV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WYV entry

There are 4 chains in PDB entry 2WYV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1MET 257
B
 MET 1LEU 259
C
 MET 1LEU 259
D
 MET 1MET 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 2WYV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 33Right-handed alpha
Helix 2
2
A
43 45Right-handed 310
Helix 3
3
A
46 57Right-handed alpha
Helix 4
4
A
69 85Right-handed alpha
Helix 5
5
A
98 103Right-handed alpha
Helix 6
6
A
105 109Right-handed 310
Helix 7
7
A
110 122Right-handed alpha
Helix 8
8
A
122 133Right-handed alpha
Helix 9
9
A
147 151Right-handed 310
Helix 10
10
A
158 179Right-handed alpha
Helix 11
11
A
180 182Right-handed 310
Helix 12
12
A
196 201Right-handed 310
Helix 13
13
A
203 215Right-handed alpha
Helix 14
14
A
222 235Right-handed alpha
Helix 15
15
A
236 239Right-handed 310
Helix 16
16
A
251 254Right-handed 310
Helix 17
17
B
21 34Right-handed alpha
Helix 18
18
B
43 45Right-handed 310
Helix 19
19
B
46 57Right-handed alpha
Helix 20
20
B
69 85Right-handed alpha
Helix 21
21
B
98 103Right-handed alpha
Helix 22
22
B
105 109Right-handed 310
Helix 23
23
B
110 122Right-handed alpha
Helix 24
24
B
122 133Right-handed alpha
Helix 25
25
B
147 151Right-handed 310
Helix 26
26
B
158 179Right-handed alpha
Helix 27
27
B
180 182Right-handed 310
Helix 28
28
B
208 215Right-handed alpha
Helix 29
29
B
222 235Right-handed alpha
Helix 30
30
B
236 239Right-handed 310
Helix 31
31
B
251 254Right-handed 310
Helix 32
32
C
21 33Right-handed alpha
Helix 33
33
C
43 45Right-handed 310
Helix 34
34
C
46 57Right-handed alpha
Helix 35
35
C
69 85Right-handed alpha
Helix 36
36
C
98 103Right-handed alpha
Helix 37
37
C
105 109Right-handed 310
Helix 38
38
C
110 122Right-handed alpha
Helix 39
39
C
122 133Right-handed alpha
Helix 40
40
C
147 151Right-handed 310
Helix 41
41
C
158 179Right-handed alpha
Helix 42
42
C
180 182Right-handed 310
Helix 43
43
C
206 215Right-handed alpha
Helix 44
44
C
222 235Right-handed alpha
Helix 45
45
C
236 239Right-handed 310
Helix 46
46
C
251 254Right-handed 310
Helix 47
47
D
21 33Right-handed alpha
Helix 48
48
D
43 45Right-handed 310
Helix 49
49
D
46 57Right-handed alpha
Helix 50
50
D
69 85Right-handed alpha
Helix 51
51
D
98 103Right-handed alpha
Helix 52
52
D
105 109Right-handed 310
Helix 53
53
D
110 122Right-handed alpha
Helix 54
54
D
122 133Right-handed alpha
Helix 55
55
D
147 151Right-handed 310
Helix 56
56
D
158 179Right-handed alpha
Helix 57
57
D
180 182Right-handed 310
Helix 58
58
D
195 201Right-handed alpha
Helix 59
59
D
203 215Right-handed alpha
Helix 60
60
D
222 235Right-handed alpha
Helix 61
61
D
236 239Right-handed 310
Helix 62
62
D
251 254Right-handed 310
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There are 6 sheets in PDB entry 2WYV. Click on sheet of interest to get list of strands forming it: AA, AB, BA, CA, CB, A,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
B
2 4anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 64first strand
Strand 2
A
36 41parallel
Strand 3
A
10 14parallel
Strand 4
A
87 92parallel
Strand 5
A
136 146parallel
Strand 6
A
184 190parallel
Strand 7
A
245 248parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 64first strand
Strand 2
B
36 41parallel
Strand 3
B
10 14parallel
Strand 4
B
87 92parallel
Strand 5
B
136 146parallel
Strand 6
B
184 190parallel
Strand 7
B
245 248parallel
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There are 2 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
D
2 4anti-parallel
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There are 7 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 64first strand
Strand 2
C
36 41parallel
Strand 3
C
10 14parallel
Strand 4
C
87 92parallel
Strand 5
C
136 146parallel
Strand 6
C
184 190parallel
Strand 7
C
245 248parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 64first strand
Strand 2
D
36 41parallel
Strand 3
D
10 14parallel
Strand 4
D
87 92parallel
Strand 5
D
136 146parallel
Strand 6
D
184 190parallel
Strand 7
D
245 248parallel
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