Analysis of interatomic Contacts of Structural Units in PDB entry:
2WYY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2WYY entry

There are 12 chains in PDB entry 2WYY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LYS 422
C	SER 2	LYS 422
D	SER 2	LYS 422
F	SER 2	LYS 422
H	SER 2	LYS 422
I	SER 2	LYS 422
J	SER 2	LYS 422
K	SER 2	LYS 422
L	SER 2	LYS 422
M	SER 2	LYS 422
R	U 18	U 62
S	U 18	U 62

There are207 helices in PDB entry 2WYY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	28	33	Right-handed alpha
Helix 2	2	A	47	60	Right-handed alpha
Helix 3	3	A	65	77	Right-handed alpha
Helix 4	4	A	129	147	Right-handed alpha
Helix 5	5	A	151	156	Right-handed alpha
Helix 6	6	A	156	161	Right-handed alpha
Helix 7	7	A	182	187	Right-handed 310
Helix 8	8	A	188	205	Right-handed alpha
Helix 9	9	A	208	212	Right-handed 310
Helix 10	10	A	213	218	Right-handed alpha
Helix 11	11	A	219	221	Right-handed 310
Helix 12	12	A	225	239	Right-handed alpha
Helix 13	13	A	241	248	Right-handed alpha
Helix 14	14	A	251	262	Right-handed alpha
Helix 15	15	A	274	278	Right-handed 310
Helix 16	16	A	294	308	Right-handed alpha
Helix 17	17	A	312	316	Right-handed 310
Helix 18	18	A	323	340	Right-handed alpha
Helix 19	19	A	374	384	Right-handed alpha
Helix 20	20	A	390	402	Right-handed alpha
Helix 21	21	A	411	421	Right-handed alpha
Helix 22	22	C	47	60	Right-handed alpha
Helix 23	23	C	65	77	Right-handed alpha
Helix 24	24	C	129	147	Right-handed alpha
Helix 25	25	C	151	156	Right-handed alpha
Helix 26	26	C	156	161	Right-handed alpha
Helix 27	27	C	182	187	Right-handed 310
Helix 28	28	C	188	205	Right-handed alpha
Helix 29	29	C	208	212	Right-handed 310
Helix 30	30	C	213	218	Right-handed alpha
Helix 31	31	C	219	221	Right-handed 310
Helix 32	32	C	225	239	Right-handed alpha
Helix 33	33	C	241	248	Right-handed alpha
Helix 34	34	C	251	262	Right-handed alpha
Helix 35	35	C	274	278	Right-handed 310
Helix 36	36	C	294	308	Right-handed alpha
Helix 37	37	C	312	316	Right-handed 310
Helix 38	38	C	323	340	Right-handed alpha
Helix 39	39	C	374	384	Right-handed alpha
Helix 40	40	C	390	402	Right-handed alpha
Helix 41	41	C	411	421	Right-handed alpha
Helix 42	42	D	47	60	Right-handed alpha
Helix 43	43	D	65	77	Right-handed alpha
Helix 44	44	D	129	147	Right-handed alpha
Helix 45	45	D	151	156	Right-handed alpha
Helix 46	46	D	156	161	Right-handed alpha
Helix 47	47	D	182	187	Right-handed 310
Helix 48	48	D	188	205	Right-handed alpha
Helix 49	49	D	208	212	Right-handed 310
Helix 50	50	D	213	218	Right-handed alpha
Helix 51	51	D	219	221	Right-handed 310
Helix 52	52	D	225	239	Right-handed alpha
Helix 53	53	D	241	248	Right-handed alpha
Helix 54	54	D	251	262	Right-handed alpha
Helix 55	55	D	274	278	Right-handed 310
Helix 56	56	D	294	308	Right-handed alpha
Helix 57	57	D	312	316	Right-handed 310
Helix 58	58	D	323	340	Right-handed alpha
Helix 59	59	D	374	384	Right-handed alpha
Helix 60	60	D	390	402	Right-handed alpha
Helix 61	61	D	411	421	Right-handed alpha
Helix 62	62	F	28	33	Right-handed alpha
Helix 63	63	F	47	60	Right-handed alpha
Helix 64	64	F	65	77	Right-handed alpha
Helix 65	65	F	129	147	Right-handed alpha
Helix 66	66	F	151	156	Right-handed alpha
Helix 67	67	F	156	161	Right-handed alpha
Helix 68	68	F	182	187	Right-handed 310
Helix 69	69	F	188	205	Right-handed alpha
Helix 70	70	F	208	212	Right-handed 310
Helix 71	71	F	213	218	Right-handed alpha
Helix 72	72	F	219	221	Right-handed 310
Helix 73	73	F	225	239	Right-handed alpha
Helix 74	74	F	241	248	Right-handed alpha
Helix 75	75	F	251	262	Right-handed alpha
Helix 76	76	F	274	278	Right-handed 310
Helix 77	77	F	294	308	Right-handed alpha
Helix 78	78	F	312	316	Right-handed 310
Helix 79	79	F	323	340	Right-handed alpha
Helix 80	80	F	374	384	Right-handed alpha
Helix 81	81	F	390	402	Right-handed alpha
Helix 82	82	F	411	421	Right-handed alpha
Helix 83	83	H	28	33	Right-handed alpha
Helix 84	84	H	47	60	Right-handed alpha
Helix 85	85	H	65	77	Right-handed alpha
Helix 86	86	H	129	147	Right-handed alpha
Helix 87	87	H	151	156	Right-handed alpha
Helix 88	88	H	156	161	Right-handed alpha
Helix 89	89	H	182	187	Right-handed 310
Helix 90	90	H	188	205	Right-handed alpha
Helix 91	91	H	208	212	Right-handed 310
Helix 92	92	H	213	218	Right-handed alpha
Helix 93	93	H	219	221	Right-handed 310
Helix 94	94	H	225	239	Right-handed alpha
Helix 95	95	H	241	248	Right-handed alpha
Helix 96	96	H	251	262	Right-handed alpha
Helix 97	97	H	274	278	Right-handed 310
Helix 98	98	H	294	308	Right-handed alpha
Helix 99	99	H	312	316	Right-handed 310
Helix 100	100	H	323	340	Right-handed alpha
Helix 101	101	H	374	384	Right-handed alpha
Helix 102	102	H	390	402	Right-handed alpha
Helix 103	103	H	411	421	Right-handed alpha
Helix 104	104	I	28	33	Right-handed alpha
Helix 105	105	I	47	60	Right-handed alpha
Helix 106	106	I	65	77	Right-handed alpha
Helix 107	107	I	129	147	Right-handed alpha
Helix 108	108	I	151	156	Right-handed alpha
Helix 109	109	I	156	161	Right-handed alpha
Helix 110	110	I	182	187	Right-handed 310
Helix 111	111	I	188	205	Right-handed alpha
Helix 112	112	I	208	212	Right-handed 310
Helix 113	113	I	213	218	Right-handed alpha
Helix 114	114	I	219	221	Right-handed 310
Helix 115	115	I	225	239	Right-handed alpha
Helix 116	116	I	241	248	Right-handed alpha
Helix 117	117	I	251	262	Right-handed alpha
Helix 118	118	I	274	278	Right-handed 310
Helix 119	119	I	294	308	Right-handed alpha
Helix 120	120	I	312	316	Right-handed 310
Helix 121	121	I	323	340	Right-handed alpha
Helix 122	122	I	374	384	Right-handed alpha
Helix 123	123	I	390	402	Right-handed alpha
Helix 124	124	I	411	421	Right-handed alpha
Helix 125	125	J	47	60	Right-handed alpha
Helix 126	126	J	65	77	Right-handed alpha
Helix 127	127	J	129	147	Right-handed alpha
Helix 128	128	J	151	156	Right-handed alpha
Helix 129	129	J	156	161	Right-handed alpha
Helix 130	130	J	182	187	Right-handed 310
Helix 131	131	J	188	205	Right-handed alpha
Helix 132	132	J	208	212	Right-handed 310
Helix 133	133	J	213	218	Right-handed alpha
Helix 134	134	J	219	221	Right-handed 310
Helix 135	135	J	225	239	Right-handed alpha
Helix 136	136	J	241	248	Right-handed alpha
Helix 137	137	J	251	262	Right-handed alpha
Helix 138	138	J	274	278	Right-handed 310
Helix 139	139	J	294	308	Right-handed alpha
Helix 140	140	J	312	316	Right-handed 310
Helix 141	141	J	323	340	Right-handed alpha
Helix 142	142	J	374	384	Right-handed alpha
Helix 143	143	J	390	402	Right-handed alpha
Helix 144	144	J	411	421	Right-handed alpha
Helix 145	145	K	28	33	Right-handed alpha
Helix 146	146	K	47	60	Right-handed alpha
Helix 147	147	K	65	77	Right-handed alpha
Helix 148	148	K	129	147	Right-handed alpha
Helix 149	149	K	151	156	Right-handed alpha
Helix 150	150	K	156	161	Right-handed alpha
Helix 151	151	K	182	187	Right-handed 310
Helix 152	152	K	188	205	Right-handed alpha
Helix 153	153	K	208	212	Right-handed 310
Helix 154	154	K	213	218	Right-handed alpha
Helix 155	155	K	219	221	Right-handed 310
Helix 156	156	K	225	239	Right-handed alpha
Helix 157	157	K	241	248	Right-handed alpha
Helix 158	158	K	251	262	Right-handed alpha
Helix 159	159	K	274	278	Right-handed 310
Helix 160	160	K	294	308	Right-handed alpha
Helix 161	161	K	312	316	Right-handed 310
Helix 162	162	K	323	340	Right-handed alpha
Helix 163	163	K	374	384	Right-handed alpha
Helix 164	164	K	390	402	Right-handed alpha
Helix 165	165	K	411	421	Right-handed alpha
Helix 166	166	L	28	33	Right-handed alpha
Helix 167	167	L	47	60	Right-handed alpha
Helix 168	168	L	65	77	Right-handed alpha
Helix 169	169	L	129	147	Right-handed alpha
Helix 170	170	L	151	155	Right-handed 310
Helix 171	171	L	156	161	Right-handed alpha
Helix 172	172	L	182	187	Right-handed 310
Helix 173	173	L	188	205	Right-handed alpha
Helix 174	174	L	208	212	Right-handed 310
Helix 175	175	L	213	218	Right-handed alpha
Helix 176	176	L	219	221	Right-handed 310
Helix 177	177	L	225	239	Right-handed alpha
Helix 178	178	L	241	248	Right-handed alpha
Helix 179	179	L	251	262	Right-handed alpha
Helix 180	180	L	274	278	Right-handed 310
Helix 181	181	L	294	308	Right-handed alpha
Helix 182	182	L	312	316	Right-handed 310
Helix 183	183	L	323	340	Right-handed alpha
Helix 184	184	L	374	384	Right-handed alpha
Helix 185	185	L	390	402	Right-handed alpha
Helix 186	186	L	411	421	Right-handed alpha
Helix 187	187	M	28	33	Right-handed alpha
Helix 188	188	M	47	60	Right-handed alpha
Helix 189	189	M	65	77	Right-handed alpha
Helix 190	190	M	129	147	Right-handed alpha
Helix 191	191	M	151	156	Right-handed alpha
Helix 192	192	M	156	161	Right-handed alpha
Helix 193	193	M	182	187	Right-handed 310
Helix 194	194	M	188	205	Right-handed alpha
Helix 195	195	M	208	212	Right-handed 310
Helix 196	196	M	213	218	Right-handed alpha
Helix 197	197	M	219	221	Right-handed 310
Helix 198	198	M	225	239	Right-handed alpha
Helix 199	199	M	241	248	Right-handed alpha
Helix 200	200	M	251	262	Right-handed alpha
Helix 201	201	M	274	278	Right-handed 310
Helix 202	202	M	294	308	Right-handed alpha
Helix 203	203	M	312	316	Right-handed 310
Helix 204	204	M	323	340	Right-handed alpha
Helix 205	205	M	374	384	Right-handed alpha
Helix 206	206	M	390	402	Right-handed alpha
Helix 207	207	M	411	421	Right-handed alpha

There are 30 sheets in PDB entry 2WYY. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, CA, CB, CC, CD, A, DB, C, FA, FB, HA, HB, IA, IB, IC, ID, JA, JB, JC, JD, KA, KB, KC, LA, LB, MA, MB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	12	14	first strand
Strand 2	A	5	7	anti-parallel
Strand 3	M	348	349	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	42	first strand
Strand 2	A	110	111	parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	88	90	first strand
Strand 2	A	93	96	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	F	5	7	anti-parallel
Strand 3	F	12	14	anti-parallel

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There are 3 strands in CA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	14	first strand
Strand 2	C	5	7	anti-parallel
Strand 3	L	348	349	anti-parallel

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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	110	111	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	88	90	first strand
Strand 2	C	93	96	anti-parallel

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There are 3 strands in CD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	D	5	7	anti-parallel
Strand 3	D	12	14	anti-parallel

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There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	42	first strand
Strand 2	D	110	111	parallel

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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	88	90	first strand
Strand 2	D	93	96	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	348	349	first strand
Strand 2	H	5	7	anti-parallel
Strand 3	H	12	14	anti-parallel

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There are 2 strands in FA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	41	42	first strand
Strand 2	F	110	111	parallel

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There are 2 strands in FB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	88	90	first strand
Strand 2	F	93	96	anti-parallel

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There are 2 strands in HA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	41	42	first strand
Strand 2	H	110	111	parallel

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There are 2 strands in HB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	88	90	first strand
Strand 2	H	93	96	anti-parallel

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There are 2 strands in IA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	5	7	first strand
Strand 2	I	12	14	anti-parallel

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There are 2 strands in IB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	41	42	first strand
Strand 2	I	110	111	parallel

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There are 2 strands in IC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	88	90	first strand
Strand 2	I	93	96	anti-parallel

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There are 3 strands in ID sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	348	349	first strand
Strand 2	L	5	7	anti-parallel
Strand 3	L	12	14	anti-parallel

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There are 2 strands in JA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	5	7	first strand
Strand 2	J	12	14	anti-parallel

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There are 2 strands in JB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	41	42	first strand
Strand 2	J	110	111	parallel

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There are 2 strands in JC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	88	90	first strand
Strand 2	J	93	96	anti-parallel

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There are 3 strands in JD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	348	349	first strand
Strand 2	K	5	7	anti-parallel
Strand 3	K	12	14	anti-parallel

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There are 2 strands in KA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	41	42	first strand
Strand 2	K	110	111	parallel

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There are 2 strands in KB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	88	90	first strand
Strand 2	K	93	96	anti-parallel

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There are 3 strands in KC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	348	349	first strand
Strand 2	M	5	7	anti-parallel
Strand 3	M	12	14	anti-parallel

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There are 2 strands in LA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	41	42	first strand
Strand 2	L	110	111	parallel

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There are 2 strands in LB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	88	90	first strand
Strand 2	L	93	96	anti-parallel

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There are 2 strands in MA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	41	42	first strand
Strand 2	M	110	111	parallel

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There are 2 strands in MB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	88	90	first strand
Strand 2	M	93	96	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2WYY

Analysis of interatomic Contacts of Structural Units in PDB entry:
2WYY