Analysis of interatomic Contacts of Structural Units in PDB entry:
2WZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2WZR entry

There are 4 chains in PDB entry 2WZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 THR 1LYS 218
2
 ARG 13GLN 219
3
 GLY 1GLN 221
4
 SER 15ALA 85
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2WZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
4 8Right-handed 310
Helix 2
2
1
15 19Right-handed 310
Helix 3
3
1
27 30Right-handed 310
Helix 4
4
1
31 37Right-handed alpha
Helix 5
5
1
53 57Right-handed 310
Helix 6
6
1
61 68Right-handed alpha
Helix 7
7
2
45 49Right-handed 310
Helix 8
8
2
56 59Right-handed 310
Helix 9
9
2
89 97Right-handed alpha
Helix 10
10
2
134 143Right-handed 310
Helix 11
11
3
43 51Right-handed alpha
Helix 12
12
3
89 96Right-handed alpha
Helix 13
13
3
136 141Right-handed alpha
Helix 14
14
4
27 32Right-handed alpha
Helix 15
15
4
66 74Right-handed alpha
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There are 17 sheets in PDB entry 2WZR. Click on sheet of interest to get list of strands forming it: 1A, 1B, 1C, 1D, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 3A, 3B, 3C, 3D, 3E, 3F,

There are 4 strands in 1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
39 44first strand
Strand 2
1
181 194anti-parallel
Strand 3
1
70 82anti-parallel
Strand 4
1
113 118anti-parallel
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There are 4 strands in 1B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
39 44first strand
Strand 2
1
181 194anti-parallel
Strand 3
1
70 82anti-parallel
Strand 4
1
127 128anti-parallel
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There are 2 strands in 1C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
113 118first strand
Strand 2
1
70 82anti-parallel
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There are 3 strands in 1D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
49 51first strand
Strand 2
1
173 175anti-parallel
Strand 3
1
89 91anti-parallel
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There are 2 strands in 2A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
15 19first strand
Strand 2
2
22 26anti-parallel
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There are 4 strands in 2B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
33 34first strand
Strand 2
2
155 160parallel
Strand 3
2
98 111anti-parallel
Strand 4
2
169 170anti-parallel
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There are 5 strands in 2C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
33 34first strand
Strand 2
2
155 160parallel
Strand 3
2
98 111anti-parallel
Strand 4
2
197 214anti-parallel
Strand 5
2
62 70anti-parallel
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There are 2 strands in 2D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
53 54first strand
Strand 2
2
197 214parallel
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There are 5 strands in 2E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
33 34first strand
Strand 2
2
155 160parallel
Strand 3
2
98 111anti-parallel
Strand 4
2
197 214anti-parallel
Strand 5
2
53 54parallel
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There are 2 strands in 2F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
169 170first strand
Strand 2
2
98 111anti-parallel
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There are 4 strands in 2G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
78 83first strand
Strand 2
2
177 188anti-parallel
Strand 3
2
118 127anti-parallel
Strand 4
2
145 148anti-parallel
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There are 2 strands in 3A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
53 54first strand
Strand 2
3
200 206anti-parallel
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There are 2 strands in 3B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
62 63first strand
Strand 2
3
200 206parallel
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There are 4 strands in 3C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
155 160first strand
Strand 2
3
105 111anti-parallel
Strand 3
3
200 206anti-parallel
Strand 4
3
62 63parallel
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There are 4 strands in 3D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
155 160first strand
Strand 2
3
105 111anti-parallel
Strand 3
3
200 206anti-parallel
Strand 4
3
53 54anti-parallel
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There are 4 strands in 3E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
73 78first strand
Strand 2
3
184 192anti-parallel
Strand 3
3
119 126anti-parallel
Strand 4
3
144 149anti-parallel
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There are 3 strands in 3F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
169 170first strand
Strand 2
3
98 102anti-parallel
Strand 3
3
211 215anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il