Analysis of interatomic Contacts of Structural Units in PDB entry:
2X0G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2X0G entry

There are 2 chains in PDB entry 2X0G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3ARG 320
B
 GLU 6MET 145
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 2X0G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 11Right-handed 310
Helix 2
2
A
57 71Right-handed alpha
Helix 3
3
A
100 106Right-handed alpha
Helix 4
4
A
112 133Right-handed alpha
Helix 5
5
A
141 143Right-handed 310
Helix 6
6
A
180 184Right-handed 310
Helix 7
7
A
185 190Right-handed alpha
Helix 8
8
A
196 213Right-handed alpha
Helix 9
9
A
221 231Right-handed alpha
Helix 10
10
A
237 242Right-handed alpha
Helix 11
11
A
245 254Right-handed alpha
Helix 12
12
A
265 272Right-handed alpha
Helix 13
13
A
279 289Right-handed alpha
Helix 14
14
A
292 320Right-handed alpha
Helix 15
15
B
6 20Right-handed alpha
Helix 16
16
B
28 38Right-handed alpha
Helix 17
17
B
44 56Right-handed alpha
Helix 18
18
B
64 71Right-handed alpha
Helix 19
19
B
82 93Right-handed alpha
Helix 20
20
B
101 111Right-handed alpha
Helix 21
21
B
117 129Right-handed alpha
Helix 22
22
B
138 145Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2X0G. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 21first strand
Strand 2
A
25 32anti-parallel
Strand 3
A
38 45anti-parallel
Strand 4
A
88 93anti-parallel
Strand 5
A
79 84anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
166 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 147first strand
Strand 2
A
157 159anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 100first strand
Strand 2
B
136 137anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il