Analysis of interatomic Contacts of Structural Units in PDB entry:
2X0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2X0J entry

There is 1 chain in PDB entry 2X0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 22TYR 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2X0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 44Right-handed alpha
Helix 2
2
A
55 71Right-handed alpha
Helix 3
3
A
71 73Right-handed 310
Helix 4
4
A
84 89Right-handed 310
Helix 5
5
A
108 129Right-handed alpha
Helix 6
6
A
141 153Right-handed alpha
Helix 7
7
A
164 179Right-handed alpha
Helix 8
8
A
203 206Right-handed 310
Helix 9
9
A
224 234Right-handed alpha
Helix 10
10
A
234 244Right-handed alpha
Helix 11
11
A
247 263Right-handed alpha
Helix 12
12
A
278 280Right-handed 310
Helix 13
13
A
308 328Right-handed alpha
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There are 4 sheets in PDB entry 2X0J. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 81first strand
Strand 2
A
48 52parallel
Strand 3
A
23 27parallel
Strand 4
A
93 96parallel
Strand 5
A
134 137parallel
Strand 6
A
160 162parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 187first strand
Strand 2
A
208 209anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
200 201anti-parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
268 276first strand
Strand 2
A
283 294anti-parallel
Strand 3
A
297 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il