Analysis of interatomic Contacts of Structural Units in PDB entry:
2X47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2X47 entry

There is 1 chain in PDB entry 2X47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 91ALA 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 2X47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
93 104Right-handed alpha
Helix 2
2
A
106 111Right-handed alpha
Helix 3
3
A
112 114Right-handed 310
Helix 4
4
A
123 125Right-handed 310
Helix 5
5
A
127 133Right-handed alpha
Helix 6
6
A
147 152Right-handed alpha
Helix 7
7
A
160 162Right-handed 310
Helix 8
8
A
181 192Right-handed alpha
Helix 9
9
A
192 201Right-handed alpha
Helix 10
10
A
236 257Right-handed alpha
Helix 11
11
A
275 295Right-handed alpha
Helix 12
12
A
296 298Right-handed 310
Helix 13
13
A
307 322Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2X47. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 121first strand
Strand 2
A
164 165parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 158first strand
Strand 2
A
300 305parallel
Strand 3
A
261 264parallel
Strand 4
A
168 172parallel
Strand 5
A
222 226parallel
Strand 6
A
210 214anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il