Analysis of interatomic Contacts of Structural Units in PDB entry:
2XAU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XAU entry

There are 2 chains in PDB entry 2XAU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ARG 749
B
 SER 3VAL 747
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 2XAU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 34Right-handed alpha
Helix 2
2
A
59 69Right-handed alpha
Helix 3
3
A
80 91Right-handed alpha
Helix 4
4
A
92 97Right-handed 310
Helix 5
5
A
98 109Right-handed alpha
Helix 6
6
A
121 135Right-handed alpha
Helix 7
7
A
136 140Right-handed 310
Helix 8
8
A
149 164Right-handed alpha
Helix 9
9
A
193 203Right-handed alpha
Helix 10
10
A
216 220Right-handed 310
Helix 11
11
A
221 238Right-handed alpha
Helix 12
12
A
252 259Right-handed alpha
Helix 13
13
A
285 301Right-handed alpha
Helix 14
14
A
312 335Right-handed alpha
Helix 15
15
A
349 354Right-handed alpha
Helix 16
16
A
355 358Right-handed 310
Helix 17
17
A
377 382Right-handed alpha
Helix 18
18
A
417 427Right-handed alpha
Helix 19
19
A
428 430Right-handed 310
Helix 20
20
A
441 448Right-handed alpha
Helix 21
21
A
455 460Right-handed 310
Helix 22
22
A
462 472Right-handed alpha
Helix 23
23
A
476 480Right-handed 310
Helix 24
24
A
487 501Right-handed alpha
Helix 25
25
A
511 518Right-handed alpha
Helix 26
26
A
523 533Right-handed alpha
Helix 27
27
A
534 537Right-handed 310
Helix 28
28
A
538 550Right-handed alpha
Helix 29
29
A
561 571Right-handed alpha
Helix 30
30
A
577 590Right-handed alpha
Helix 31
31
A
591 598Right-handed alpha
Helix 32
32
A
598 606Right-handed alpha
Helix 33
33
A
609 630Right-handed alpha
Helix 34
34
A
643 657Right-handed alpha
Helix 35
35
A
714 722Right-handed alpha
Helix 36
36
A
727 731Right-handed 310
Helix 37
37
A
734 749Right-handed alpha
Helix 38
38
B
18 33Right-handed alpha
Helix 39
39
B
59 69Right-handed alpha
Helix 40
40
B
80 91Right-handed alpha
Helix 41
41
B
92 97Right-handed 310
Helix 42
42
B
98 109Right-handed alpha
Helix 43
43
B
121 135Right-handed alpha
Helix 44
44
B
136 140Right-handed 310
Helix 45
45
B
149 165Right-handed alpha
Helix 46
46
B
193 203Right-handed alpha
Helix 47
47
B
216 220Right-handed 310
Helix 48
48
B
221 238Right-handed alpha
Helix 49
49
B
252 259Right-handed alpha
Helix 50
50
B
285 301Right-handed alpha
Helix 51
51
B
312 335Right-handed alpha
Helix 52
52
B
349 356Right-handed alpha
Helix 53
53
B
377 382Right-handed alpha
Helix 54
54
B
417 427Right-handed alpha
Helix 55
55
B
428 430Right-handed 310
Helix 56
56
B
441 448Right-handed alpha
Helix 57
57
B
455 460Right-handed 310
Helix 58
58
B
462 472Right-handed alpha
Helix 59
59
B
476 480Right-handed 310
Helix 60
60
B
487 501Right-handed alpha
Helix 61
61
B
511 518Right-handed alpha
Helix 62
62
B
523 533Right-handed alpha
Helix 63
63
B
534 537Right-handed 310
Helix 64
64
B
538 550Right-handed alpha
Helix 65
65
B
558 560Right-handed 310
Helix 66
66
B
561 571Right-handed alpha
Helix 67
67
B
577 590Right-handed alpha
Helix 68
68
B
591 598Right-handed alpha
Helix 69
69
B
598 606Right-handed alpha
Helix 70
70
B
609 630Right-handed alpha
Helix 71
71
B
643 657Right-handed alpha
Helix 72
72
B
674 676Right-handed 310
Helix 73
73
B
714 722Right-handed alpha
Helix 74
74
B
727 731Right-handed 310
Helix 75
75
B
734 747Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 2XAU. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC, BD,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 181first strand
Strand 2
A
172 176anti-parallel
Strand 3
A
188 192parallel
Strand 4
A
142 147parallel
Strand 5
A
209 214parallel
Strand 6
A
242 247parallel
Strand 7
A
111 115parallel
Strand 8
A
264 266parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
434 438parallel
Strand 3
A
388 393parallel
Strand 4
A
305 309parallel
Strand 5
A
370 375parallel
Strand 6
A
339 344parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
396 403first strand
Strand 2
A
408 415anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 663first strand
Strand 2
A
693 701anti-parallel
Strand 3
A
705 712anti-parallel
Strand 4
A
678 681parallel
Strand 5
A
670 672anti-parallel
Strand 6
A
660 663anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 181first strand
Strand 2
B
172 176anti-parallel
Strand 3
B
188 192parallel
Strand 4
B
142 147parallel
Strand 5
B
209 214parallel
Strand 6
B
242 247parallel
Strand 7
B
111 115parallel
Strand 8
B
264 266parallel
Back to list of sheets
Back to top of page

There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
274 277first strand
Strand 2
B
434 438parallel
Strand 3
B
388 393parallel
Strand 4
B
305 309parallel
Strand 5
B
370 375parallel
Strand 6
B
339 344parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
396 403first strand
Strand 2
B
408 415anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
660 663first strand
Strand 2
B
693 701anti-parallel
Strand 3
B
705 712anti-parallel
Strand 4
B
678 681parallel
Strand 5
B
670 672anti-parallel
Strand 6
B
660 663anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il