Analysis of interatomic Contacts of Structural Units in PDB entry:
2XDN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XDN entry

There are 4 chains in PDB entry 2XDN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5LYS 210
B
 LYS 6LYS 210
C
 THR 5LYS 210
D
 LYS 6LYS 210
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 2XDN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 28Right-handed alpha
Helix 2
2
A
33 42Right-handed alpha
Helix 3
3
A
46 52Right-handed alpha
Helix 4
4
A
54 69Right-handed alpha
Helix 5
5
A
70 78Right-handed alpha
Helix 6
6
A
84 103Right-handed alpha
Helix 7
7
A
103 116Right-handed alpha
Helix 8
8
A
124 151Right-handed alpha
Helix 9
9
A
159 181Right-handed alpha
Helix 10
10
A
182 185Right-handed 310
Helix 11
11
A
190 205Right-handed alpha
Helix 12
12
B
8 28Right-handed alpha
Helix 13
13
B
33 42Right-handed alpha
Helix 14
14
B
44 52Right-handed alpha
Helix 15
15
B
54 65Right-handed alpha
Helix 16
16
B
66 69Right-handed 310
Helix 17
17
B
70 78Right-handed alpha
Helix 18
18
B
84 103Right-handed alpha
Helix 19
19
B
103 116Right-handed alpha
Helix 20
20
B
120 123Right-handed 310
Helix 21
21
B
124 151Right-handed alpha
Helix 22
22
B
159 181Right-handed alpha
Helix 23
23
B
182 185Right-handed 310
Helix 24
24
B
190 205Right-handed alpha
Helix 25
25
B
206 208Right-handed 310
Helix 26
26
C
5 28Right-handed alpha
Helix 27
27
C
33 41Right-handed alpha
Helix 28
28
C
44 52Right-handed alpha
Helix 29
29
C
54 66Right-handed alpha
Helix 30
30
C
67 69Right-handed 310
Helix 31
31
C
70 79Right-handed alpha
Helix 32
32
C
84 103Right-handed alpha
Helix 33
33
C
103 116Right-handed alpha
Helix 34
34
C
120 123Right-handed 310
Helix 35
35
C
124 151Right-handed alpha
Helix 36
36
C
159 181Right-handed alpha
Helix 37
37
C
190 205Right-handed alpha
Helix 38
38
D
7 28Right-handed alpha
Helix 39
39
D
33 42Right-handed alpha
Helix 40
40
D
44 52Right-handed alpha
Helix 41
41
D
54 65Right-handed alpha
Helix 42
42
D
66 69Right-handed 310
Helix 43
43
D
70 79Right-handed alpha
Helix 44
44
D
84 103Right-handed alpha
Helix 45
45
D
103 116Right-handed alpha
Helix 46
46
D
123 151Right-handed alpha
Helix 47
47
D
159 181Right-handed alpha
Helix 48
48
D
190 205Right-handed alpha
Helix 49
49
D
206 208Right-handed 310
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There are no sheets in PDB entry 2XDN
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il