Analysis of interatomic Contacts of Structural Units in PDB entry:
2XGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XGG entry

There are 2 chains in PDB entry 2XGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 71GLY 217
B
 MET 70GLY 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 2XGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
88 106Right-handed alpha
Helix 2
2
A
132 136Right-handed 310
Helix 3
3
A
137 148Right-handed alpha
Helix 4
4
A
156 171Right-handed alpha
Helix 5
5
A
192 198Right-handed alpha
Helix 6
6
A
198 207Right-handed alpha
Helix 7
7
B
88 106Right-handed alpha
Helix 8
8
B
132 136Right-handed 310
Helix 9
9
B
137 146Right-handed alpha
Helix 10
10
B
156 171Right-handed alpha
Helix 11
11
B
193 198Right-handed alpha
Helix 12
12
B
198 207Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2XGG. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 128first strand
Strand 2
A
113 120anti-parallel
Strand 3
A
75 82parallel
Strand 4
A
181 187parallel
Strand 5
A
210 215parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 128first strand
Strand 2
B
113 120anti-parallel
Strand 3
B
75 82parallel
Strand 4
B
181 187parallel
Strand 5
B
210 215parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il