Analysis of interatomic Contacts of Structural Units in PDB entry:
2XGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XGJ entry

There are 4 chains in PDB entry 2XGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 80LEU 1073
B
 HIS 117LEU 1073
C
 A 1 A 5
D
 A 1 A 5
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 2XGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
133 137Right-handed 310
Helix 2
2
A
151 164Right-handed alpha
Helix 3
3
A
176 191Right-handed alpha
Helix 4
4
A
201 217Right-handed alpha
Helix 5
5
A
239 249Right-handed alpha
Helix 6
6
A
252 254Right-handed 310
Helix 7
7
A
264 269Right-handed 310
Helix 8
8
A
272 283Right-handed alpha
Helix 9
9
A
298 311Right-handed alpha
Helix 10
10
A
349 359Right-handed alpha
Helix 11
11
A
392 405Right-handed alpha
Helix 12
12
A
415 425Right-handed alpha
Helix 13
13
A
433 449Right-handed alpha
Helix 14
14
A
452 456Right-handed 310
Helix 15
15
A
458 471Right-handed alpha
Helix 16
16
A
480 493Right-handed alpha
Helix 17
17
A
504 508Right-handed 310
Helix 18
18
A
533 542Right-handed alpha
Helix 19
19
A
564 573Right-handed alpha
Helix 20
20
A
586 596Right-handed alpha
Helix 21
21
A
600 608Right-handed alpha
Helix 22
22
A
608 625Right-handed alpha
Helix 23
23
A
627 634Right-handed alpha
Helix 24
24
A
641 665Right-handed alpha
Helix 25
25
A
666 671Right-handed alpha
Helix 26
26
A
672 674Right-handed 310
Helix 27
27
A
685 687Right-handed 310
Helix 28
28
A
731 735Right-handed 310
Helix 29
29
A
763 765Right-handed 310
Helix 30
30
A
786 801Right-handed alpha
Helix 31
31
A
818 836Right-handed alpha
Helix 32
32
A
838 843Right-handed alpha
Helix 33
33
A
845 856Right-handed alpha
Helix 34
34
A
858 873Right-handed alpha
Helix 35
35
A
878 892Right-handed alpha
Helix 36
36
A
902 910Right-handed alpha
Helix 37
37
A
915 926Right-handed alpha
Helix 38
38
A
932 945Right-handed alpha
Helix 39
39
A
956 980Right-handed alpha
Helix 40
40
A
985 992Right-handed alpha
Helix 41
41
A
997 1005Right-handed alpha
Helix 42
42
A
1009 1014Right-handed alpha
Helix 43
43
A
1020 1044Right-handed alpha
Helix 44
44
A
1047 1062Right-handed alpha
Helix 45
45
A
1063 1068Right-handed 310
Helix 46
46
B
133 137Right-handed 310
Helix 47
47
B
151 163Right-handed alpha
Helix 48
48
B
177 191Right-handed alpha
Helix 49
49
B
201 217Right-handed alpha
Helix 50
50
B
239 249Right-handed alpha
Helix 51
51
B
251 254Right-handed 310
Helix 52
52
B
264 269Right-handed 310
Helix 53
53
B
273 283Right-handed alpha
Helix 54
54
B
298 311Right-handed alpha
Helix 55
55
B
349 358Right-handed alpha
Helix 56
56
B
391 404Right-handed alpha
Helix 57
57
B
415 425Right-handed alpha
Helix 58
58
B
433 449Right-handed alpha
Helix 59
59
B
452 457Right-handed 310
Helix 60
60
B
458 470Right-handed alpha
Helix 61
61
B
480 493Right-handed alpha
Helix 62
62
B
533 541Right-handed alpha
Helix 63
63
B
564 573Right-handed alpha
Helix 64
64
B
586 596Right-handed alpha
Helix 65
65
B
600 608Right-handed alpha
Helix 66
66
B
608 624Right-handed alpha
Helix 67
67
B
627 635Right-handed alpha
Helix 68
68
B
641 666Right-handed alpha
Helix 69
69
B
666 671Right-handed alpha
Helix 70
70
B
810 815Right-handed alpha
Helix 71
71
B
818 838Right-handed alpha
Helix 72
72
B
839 842Right-handed 310
Helix 73
73
B
845 856Right-handed alpha
Helix 74
74
B
858 873Right-handed alpha
Helix 75
75
B
878 892Right-handed alpha
Helix 76
76
B
902 911Right-handed alpha
Helix 77
77
B
915 926Right-handed alpha
Helix 78
78
B
932 945Right-handed alpha
Helix 79
79
B
956 980Right-handed alpha
Helix 80
80
B
985 991Right-handed alpha
Helix 81
81
B
997 1006Right-handed alpha
Helix 82
82
B
1009 1015Right-handed alpha
Helix 83
83
B
1020 1045Right-handed alpha
Helix 84
84
B
1047 1062Right-handed alpha
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There are 7 sheets in PDB entry 2XGJ. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, BA, BB, BC,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 94first strand
Strand 2
A
112 124anti-parallel
Strand 3
A
314 319anti-parallel
Strand 4
A
166 170parallel
Strand 5
A
288 293parallel
Strand 6
A
256 262parallel
Strand 7
A
194 199parallel
Strand 8
A
234 238parallel
Strand 9
A
219 222parallel
Strand 10
A
227 228anti-parallel
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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 342first strand
Strand 2
A
326 332anti-parallel
Strand 3
A
553 559parallel
Strand 4
A
515 518parallel
Strand 5
A
409 413parallel
Strand 6
A
498 502parallel
Strand 7
A
472 475parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 524first strand
Strand 2
A
529 531anti-parallel
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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 762first strand
Strand 2
A
717 727anti-parallel
Strand 3
A
688 700anti-parallel
Strand 4
A
678 684anti-parallel
Strand 5
A
767 774anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
120 124first strand
Strand 2
B
314 319anti-parallel
Strand 3
B
166 171parallel
Strand 4
B
288 293parallel
Strand 5
B
256 262parallel
Strand 6
B
194 199parallel
Strand 7
B
234 238parallel
Strand 8
B
219 222parallel
Strand 9
B
227 228anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 342first strand
Strand 2
B
326 332anti-parallel
Strand 3
B
553 559parallel
Strand 4
B
515 518parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
409 412first strand
Strand 2
B
498 501parallel
Strand 3
B
472 475parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il