Analysis of interatomic Contacts of Structural Units in PDB entry:
2XI7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XI7 entry

There are 4 chains in PDB entry 2XI7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ALA 183
B
 GLY 0ALA 183
C
 GLY 0ALA 183
D
 GLY 0ALA 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2XI7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 16Right-handed alpha
Helix 2
2
A
18 46Right-handed alpha
Helix 3
3
A
54 63Right-handed alpha
Helix 4
4
A
99 121Right-handed alpha
Helix 5
5
A
142 149Right-handed alpha
Helix 6
6
A
158 172Right-handed alpha
Helix 7
7
A
175 180Right-handed alpha
Helix 8
8
B
2 16Right-handed alpha
Helix 9
9
B
18 46Right-handed alpha
Helix 10
10
B
54 63Right-handed alpha
Helix 11
11
B
99 121Right-handed alpha
Helix 12
12
B
142 149Right-handed alpha
Helix 13
13
B
158 173Right-handed alpha
Helix 14
14
B
175 180Right-handed alpha
Helix 15
15
C
2 16Right-handed alpha
Helix 16
16
C
18 46Right-handed alpha
Helix 17
17
C
54 63Right-handed alpha
Helix 18
18
C
99 121Right-handed alpha
Helix 19
19
C
142 149Right-handed alpha
Helix 20
20
C
158 173Right-handed alpha
Helix 21
21
C
175 180Right-handed alpha
Helix 22
22
D
2 16Right-handed alpha
Helix 23
23
D
18 45Right-handed alpha
Helix 24
24
D
54 63Right-handed alpha
Helix 25
25
D
99 121Right-handed alpha
Helix 26
26
D
142 149Right-handed alpha
Helix 27
27
D
158 173Right-handed alpha
Helix 28
28
D
175 180Right-handed alpha
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There are 4 sheets in PDB entry 2XI7. Click on sheet of interest to get list of strands forming it: AA, BA, CA, A,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
87 95anti-parallel
Strand 3
A
124 131parallel
Strand 4
A
138 140anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 84first strand
Strand 2
B
87 95anti-parallel
Strand 3
B
124 131parallel
Strand 4
B
138 140anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 84first strand
Strand 2
C
87 95anti-parallel
Strand 3
C
124 131parallel
Strand 4
C
138 140anti-parallel
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There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 84first strand
Strand 2
D
87 95anti-parallel
Strand 3
D
124 131parallel
Strand 4
D
138 140anti-parallel
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