Analysis of interatomic Contacts of Structural Units in PDB entry:
2XMS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XMS entry

There is 1 chain in PDB entry 2XMS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 24ALA 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2XMS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 70Right-handed alpha
Helix 2
2
A
71 79Right-handed alpha
Helix 3
3
A
106 112Right-handed alpha
Helix 4
4
A
113 122Right-handed alpha
Helix 5
5
A
132 145Right-handed alpha
Helix 6
6
A
163 175Right-handed alpha
Helix 7
7
A
178 188Right-handed alpha
Helix 8
8
A
189 196Right-handed alpha
Helix 9
9
A
197 209Right-handed alpha
Helix 10
10
A
212 225Right-handed alpha
Helix 11
11
A
253 264Right-handed alpha
Helix 12
12
A
280 285Right-handed alpha
Helix 13
13
A
285 301Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 2XMS.

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 31first strand
Strand 2
A
34 41anti-parallel
Strand 3
A
83 87anti-parallel
Strand 4
A
50 54parallel
Strand 5
A
126 131parallel
Strand 6
A
149 155parallel
Strand 7
A
243 248parallel
Strand 8
A
269 274parallel
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