Analysis of interatomic Contacts of Structural Units in PDB entry:
2XN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XN6 entry

There are 2 chains in PDB entry 2XN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 19SER 356
B
 HIS 362ALA 395
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 2XN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 41Right-handed alpha
Helix 2
2
A
49 63Right-handed alpha
Helix 3
3
A
65 76Right-handed alpha
Helix 4
4
A
84 101Right-handed alpha
Helix 5
5
A
123 134Right-handed alpha
Helix 6
6
A
145 161Right-handed alpha
Helix 7
7
A
195 199Right-handed 310
Helix 8
8
A
256 264Right-handed alpha
Helix 9
9
A
265 276Right-handed alpha
Helix 10
10
A
296 304Right-handed alpha
Helix 11
11
A
306 310Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 2XN6. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
B
382 389anti-parallel
Strand 3
B
371 377anti-parallel
Strand 4
A
245 252anti-parallel
Strand 5
A
234 240anti-parallel
Strand 6
A
211 229anti-parallel
Strand 7
A
277 286parallel
Strand 8
B
364 366anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
B
382 389anti-parallel
Strand 3
B
371 377anti-parallel
Strand 4
A
245 252anti-parallel
Strand 5
A
234 240anti-parallel
Strand 6
A
211 229anti-parallel
Strand 7
A
200 208anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 141first strand
Strand 2
A
106 117parallel
Strand 3
A
178 189anti-parallel
Strand 4
A
341 354anti-parallel
Strand 5
A
324 337anti-parallel
Strand 6
A
288 295anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il