Analysis of interatomic Contacts of Structural Units in PDB entry:
2XNQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XNQ entry

There are 2 chains in PDB entry 2XNQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 326GLU 382
A
GLU 384ARG 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 2XNQ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
343 352Right-handed alpha
Helix 2
2
A
353 355Right-handed 310
Helix 3
3
A
373 385Right-handed alpha
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There are 2 sheets in PDB entry 2XNQ. Click on sheet of interest to get list of strands forming it: AA, AB,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
357 362first strand
Strand 2
A
366 371anti-parallel
Strand 3
A
331 335anti-parallel
Strand 4
A
395 398anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
388 389first strand
Strand 2
A
392 393anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il