Analysis of interatomic Contacts of Structural Units in PDB entry:
2XV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XV1 entry

There is 1 chain in PDB entry 2XV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 18LEU 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2XV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 54Right-handed alpha
Helix 2
2
A
68 72Right-handed 310
Helix 3
3
A
88 96Right-handed alpha
Helix 4
4
A
107 115Right-handed alpha
Helix 5
5
A
129 142Right-handed alpha
Helix 6
6
A
143 165Right-handed alpha
Helix 7
7
A
166 171Right-handed alpha
Helix 8
8
A
193 198Right-handed alpha
Helix 9
9
A
206 212Right-handed alpha
Helix 10
10
A
219 227Right-handed alpha
Helix 11
11
A
237 241Right-handed alpha
Helix 12
12
A
245 253Right-handed alpha
Helix 13
13
A
254 258Right-handed alpha
Helix 14
14
A
259 264Right-handed alpha
Helix 15
15
A
280 296Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 2XV1. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
27 31anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
99 103parallel
Strand 3
A
120 123parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 62first strand
Strand 2
A
79 83parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
183 186anti-parallel
Strand 3
A
174 180anti-parallel
Strand 4
A
230 235parallel
Strand 5
A
267 269parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il