Analysis of interatomic Contacts of Structural Units in PDB entry:
2XVN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XVN entry

There are 3 chains in PDB entry 2XVN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 29HIS 337
B
 SER 29HIS 337
C
 SER 29ASP 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2XVN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 49Right-handed alpha
Helix 2
2
A
64 68Right-handed 310
Helix 3
3
A
68 72Right-handed 310
Helix 4
4
A
100 113Right-handed alpha
Helix 5
5
A
133 149Right-handed alpha
Helix 6
6
A
180 193Right-handed alpha
Helix 7
7
A
215 222Right-handed alpha
Helix 8
8
A
234 238Right-handed 310
Helix 9
9
A
239 244Right-handed alpha
Helix 10
10
A
251 261Right-handed alpha
Helix 11
11
A
287 302Right-handed alpha
Helix 12
12
A
313 319Right-handed alpha
Helix 13
13
A
326 337Right-handed alpha
Helix 14
14
B
43 49Right-handed alpha
Helix 15
15
B
64 68Right-handed 310
Helix 16
16
B
68 72Right-handed 310
Helix 17
17
B
100 113Right-handed alpha
Helix 18
18
B
134 149Right-handed alpha
Helix 19
19
B
180 193Right-handed alpha
Helix 20
20
B
215 222Right-handed alpha
Helix 21
21
B
239 244Right-handed alpha
Helix 22
22
B
251 262Right-handed alpha
Helix 23
23
B
276 280Right-handed 310
Helix 24
24
B
287 302Right-handed alpha
Helix 25
25
B
313 320Right-handed alpha
Helix 26
26
B
326 337Right-handed alpha
Helix 27
27
C
44 49Right-handed alpha
Helix 28
28
C
102 112Right-handed alpha
Helix 29
29
C
143 148Right-handed alpha
Helix 30
30
C
180 189Right-handed alpha
Helix 31
31
C
215 222Right-handed alpha
Helix 32
32
C
251 259Right-handed alpha
Helix 33
33
C
291 300Right-handed alpha
Helix 34
34
C
326 333Right-handed alpha
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There are 5 sheets in PDB entry 2XVN. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB, CA,

There are 9 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
306 312parallel
Strand 3
A
268 274parallel
Strand 4
A
226 230parallel
Strand 5
A
201 204parallel
Strand 6
A
168 173parallel
Strand 7
A
116 123parallel
Strand 8
A
55 63parallel
Strand 9
A
30 35first strand
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 87first strand
Strand 2
A
93 97anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 35first strand
Strand 2
B
306 312parallel
Strand 3
B
268 274parallel
Strand 4
B
226 230parallel
Strand 5
B
201 204parallel
Strand 6
B
168 173parallel
Strand 7
B
118 123parallel
Strand 8
B
55 61parallel
Strand 9
B
30 35parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 87first strand
Strand 2
B
93 97anti-parallel
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There are 9 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 34first strand
Strand 2
C
306 312parallel
Strand 3
C
268 275parallel
Strand 4
C
226 230parallel
Strand 5
C
201 204parallel
Strand 6
C
168 172parallel
Strand 7
C
116 122parallel
Strand 8
C
55 60parallel
Strand 9
C
30 34parallel
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