Analysis of interatomic Contacts of Structural Units in PDB entry:
2XZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2XZ8 entry

There are 2 chains in PDB entry 2XZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 234LYS 368
B
 VAL 234GLU 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2XZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
238 243Right-handed 310
Helix 2
2
A
273 291Right-handed alpha
Helix 3
3
A
336 353Right-handed alpha
Helix 4
4
B
238 243Right-handed 310
Helix 5
5
B
273 291Right-handed alpha
Helix 6
6
B
336 353Right-handed alpha
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There are 2 sheets in PDB entry 2XZ8. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
309 311parallel
Strand 3
A
301 303anti-parallel
Strand 4
A
327 332parallel
Strand 5
A
258 265parallel
Strand 6
A
356 364parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 237first strand
Strand 2
B
309 311parallel
Strand 3
B
301 303anti-parallel
Strand 4
B
327 332parallel
Strand 5
B
258 265parallel
Strand 6
B
356 365parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il