Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y0J entry

There are 2 chains in PDB entry 2Y0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 446GLU 759
B
 TRP 446GLU 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2Y0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
446 451Right-handed alpha
Helix 2
2
A
455 462Right-handed alpha
Helix 3
3
A
472 474Right-handed 310
Helix 4
4
A
475 489Right-handed alpha
Helix 5
5
A
494 508Right-handed alpha
Helix 6
6
A
516 533Right-handed alpha
Helix 7
7
A
534 538Right-handed 310
Helix 8
8
A
539 553Right-handed alpha
Helix 9
9
A
561 568Right-handed alpha
Helix 10
10
A
570 576Right-handed alpha
Helix 11
11
A
579 594Right-handed alpha
Helix 12
12
A
605 622Right-handed alpha
Helix 13
13
A
624 641Right-handed alpha
Helix 14
14
A
648 665Right-handed alpha
Helix 15
15
A
666 669Right-handed 310
Helix 16
16
A
671 696Right-handed alpha
Helix 17
17
A
701 705Right-handed 310
Helix 18
18
A
705 710Right-handed 310
Helix 19
19
A
711 723Right-handed alpha
Helix 20
20
A
723 735Right-handed alpha
Helix 21
21
A
738 757Right-handed alpha
Helix 22
22
B
457 462Right-handed alpha
Helix 23
23
B
472 474Right-handed 310
Helix 24
24
B
475 489Right-handed alpha
Helix 25
25
B
494 508Right-handed alpha
Helix 26
26
B
516 534Right-handed alpha
Helix 27
27
B
539 553Right-handed alpha
Helix 28
28
B
561 568Right-handed alpha
Helix 29
29
B
570 576Right-handed alpha
Helix 30
30
B
579 594Right-handed alpha
Helix 31
31
B
605 622Right-handed alpha
Helix 32
32
B
624 642Right-handed alpha
Helix 33
33
B
648 665Right-handed alpha
Helix 34
34
B
666 670Right-handed 310
Helix 35
35
B
671 695Right-handed alpha
Helix 36
36
B
701 705Right-handed 310
Helix 37
37
B
705 710Right-handed 310
Helix 38
38
B
711 723Right-handed alpha
Helix 39
39
B
723 735Right-handed alpha
Helix 40
40
B
738 758Right-handed alpha
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There are no sheets in PDB entry 2Y0J
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