Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y0Q entry

There are 4 chains in PDB entry 2Y0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 280ALA 329
B
 SER 278ALA 329
C
 THR 281VAL 328
D
 SER 278MET 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 2Y0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
280 296Right-handed alpha
Helix 2
2
A
310 329Right-handed alpha
Helix 3
3
B
280 296Right-handed alpha
Helix 4
4
B
310 327Right-handed alpha
Helix 5
5
C
281 297Right-handed alpha
Helix 6
6
C
310 327Right-handed alpha
Helix 7
7
D
280 297Right-handed alpha
Helix 8
8
D
310 330Right-handed alpha
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There are no sheets in PDB entry 2Y0Q
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il