Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y1L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y1L entry

There are 8 chains in PDB entry 2Y1L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 222VAL 371
B
 TYR 392SER 478
C
 ASP 223PRO 370
D
 THR 390ASP 479
E
 ASP 13LEU 168
F
 ASP 13LEU 168
H
 ILE 1ASP 4
I
 ILE 2THR 4
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2Y1L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
244 251Right-handed alpha
Helix 2
2
A
252 255Right-handed 310
Helix 3
3
A
262 277Right-handed alpha
Helix 4
4
A
288 302Right-handed alpha
Helix 5
5
A
333 338Right-handed alpha
Helix 6
6
A
339 341Right-handed 310
Helix 7
7
A
345 349Right-handed 310
Helix 8
8
B
420 433Right-handed alpha
Helix 9
9
B
434 436Right-handed 310
Helix 10
10
B
438 452Right-handed alpha
Helix 11
11
B
456 458Right-handed 310
Helix 12
12
C
244 251Right-handed alpha
Helix 13
13
C
252 255Right-handed 310
Helix 14
14
C
262 277Right-handed alpha
Helix 15
15
C
288 302Right-handed alpha
Helix 16
16
C
333 338Right-handed alpha
Helix 17
17
C
339 341Right-handed 310
Helix 18
18
C
345 349Right-handed 310
Helix 19
19
D
420 433Right-handed alpha
Helix 20
20
D
434 436Right-handed 310
Helix 21
21
D
438 453Right-handed alpha
Helix 22
22
D
456 458Right-handed 310
Helix 23
23
E
13 25Right-handed alpha
Helix 24
24
E
26 36Right-handed alpha
Helix 25
25
E
49 57Right-handed alpha
Helix 26
26
E
59 69Right-handed alpha
Helix 27
27
E
82 90Right-handed alpha
Helix 28
28
E
92 102Right-handed alpha
Helix 29
29
E
115 123Right-handed alpha
Helix 30
30
E
125 135Right-handed alpha
Helix 31
31
E
148 156Right-handed alpha
Helix 32
32
E
158 167Right-handed alpha
Helix 33
33
F
13 25Right-handed alpha
Helix 34
34
F
26 36Right-handed alpha
Helix 35
35
F
49 58Right-handed alpha
Helix 36
36
F
59 69Right-handed alpha
Helix 37
37
F
82 90Right-handed alpha
Helix 38
38
F
92 102Right-handed alpha
Helix 39
39
F
115 123Right-handed alpha
Helix 40
40
F
125 135Right-handed alpha
Helix 41
41
F
148 156Right-handed alpha
Helix 42
42
F
158 167Right-handed alpha
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There are 29 sheets in PDB entry 2Y1L. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 30,

There are 1 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 240first strand
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There are 1 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 285first strand
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There are 1 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
309 315first strand
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There are 1 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 319first strand
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There are 1 strands in 5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 324first strand
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There are 1 strands in 6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 332first strand
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There are 1 strands in 7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 358first strand
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There are 1 strands in 8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 370first strand
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There are 1 strands in 9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 394first strand
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There are 1 strands in 10 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
399 403first strand
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There are 1 strands in 11 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
412 414first strand
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There are 1 strands in 12 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
418 419first strand
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There are 1 strands in 13 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
460 461first strand
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There are 1 strands in 14 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
465 468first strand
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There are 1 strands in 15 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
234 240first strand
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There are 1 strands in 16 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
280 285first strand
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There are 1 strands in 17 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
309 315first strand
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There are 1 strands in 18 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
318 319first strand
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There are 1 strands in 19 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
322 324first strand
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There are 1 strands in 20 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
330 332first strand
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There are 1 strands in 21 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
353 358first strand
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There are 1 strands in 22 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
366 369first strand
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There are 1 strands in 23 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
392 394first strand
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There are 1 strands in 24 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
399 403first strand
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There are 1 strands in 25 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
412 414first strand
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There are 1 strands in 26 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
418 419first strand
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There are 1 strands in 27 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
460 461first strand
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There are 1 strands in 28 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
465 468first strand
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There are 1 strands in 30 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 3first strand
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