Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y31


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y31 entry

There are 2 chains in PDB entry 2Y31 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 6PRO 247
B
 GLU 5PRO 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2Y31. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 44Right-handed alpha
Helix 2
2
A
49 58Right-handed alpha
Helix 3
3
A
60 65Right-handed alpha
Helix 4
4
A
70 84Right-handed alpha
Helix 5
5
A
95 114Right-handed alpha
Helix 6
6
A
115 119Right-handed 310
Helix 7
7
A
129 142Right-handed alpha
Helix 8
8
A
149 182Right-handed alpha
Helix 9
9
A
184 192Right-handed alpha
Helix 10
10
A
192 202Right-handed alpha
Helix 11
11
A
205 215Right-handed alpha
Helix 12
12
A
216 220Right-handed 310
Helix 13
13
A
221 245Right-handed alpha
Helix 14
14
B
8 12Right-handed 310
Helix 15
15
B
28 44Right-handed alpha
Helix 16
16
B
45 48Right-handed 310
Helix 17
17
B
49 57Right-handed alpha
Helix 18
18
B
61 65Right-handed 310
Helix 19
19
B
70 84Right-handed alpha
Helix 20
20
B
95 114Right-handed alpha
Helix 21
21
B
115 119Right-handed 310
Helix 22
22
B
129 142Right-handed alpha
Helix 23
23
B
149 182Right-handed alpha
Helix 24
24
B
184 192Right-handed alpha
Helix 25
25
B
192 202Right-handed alpha
Helix 26
26
B
205 215Right-handed alpha
Helix 27
27
B
216 220Right-handed 310
Helix 28
28
B
221 245Right-handed alpha
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There are no sheets in PDB entry 2Y31
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il