Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y5Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y5Y entry

There are 2 chains in PDB entry 2Y5Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4PRO 403
B
 LEU 4GLY 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 2Y5Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 27Right-handed alpha
Helix 2
2
A
29 36Right-handed alpha
Helix 3
3
A
41 70Right-handed alpha
Helix 4
4
A
71 73Right-handed 310
Helix 5
5
A
74 86Right-handed alpha
Helix 6
6
A
87 92Right-handed alpha
Helix 7
7
A
94 101Right-handed alpha
Helix 8
8
A
103 136Right-handed alpha
Helix 9
9
A
139 179Right-handed alpha
Helix 10
10
A
182 187Right-handed alpha
Helix 11
11
A
209 219Right-handed alpha
Helix 12
12
A
219 232Right-handed alpha
Helix 13
13
A
232 242Right-handed alpha
Helix 14
14
A
242 250Right-handed alpha
Helix 15
15
A
253 307Right-handed alpha
Helix 16
16
A
311 341Right-handed alpha
Helix 17
17
A
342 344Right-handed 310
Helix 18
18
A
345 353Right-handed alpha
Helix 19
19
A
355 376Right-handed alpha
Helix 20
20
A
376 400Right-handed alpha
Helix 21
21
B
6 27Right-handed alpha
Helix 22
22
B
29 36Right-handed alpha
Helix 23
23
B
41 70Right-handed alpha
Helix 24
24
B
71 73Right-handed 310
Helix 25
25
B
74 86Right-handed alpha
Helix 26
26
B
87 92Right-handed alpha
Helix 27
27
B
94 101Right-handed alpha
Helix 28
28
B
103 113Right-handed alpha
Helix 29
29
B
115 120Right-handed alpha
Helix 30
30
B
120 136Right-handed alpha
Helix 31
31
B
139 179Right-handed alpha
Helix 32
32
B
180 187Right-handed alpha
Helix 33
33
B
209 219Right-handed alpha
Helix 34
34
B
219 232Right-handed alpha
Helix 35
35
B
232 242Right-handed alpha
Helix 36
36
B
242 250Right-handed alpha
Helix 37
37
B
253 307Right-handed alpha
Helix 38
38
B
311 341Right-handed alpha
Helix 39
39
B
342 344Right-handed 310
Helix 40
40
B
345 353Right-handed alpha
Helix 41
41
B
356 376Right-handed alpha
Helix 42
42
B
376 396Right-handed alpha
Helix 43
43
B
397 399Right-handed 310
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There are no sheets in PDB entry 2Y5Y
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il