Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y66 entry

There are 2 chains in PDB entry 2Y66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ALA 197
A
 LEU 199HIS 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2Y66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
42 46Right-handed 310
Helix 3
3
A
58 65Right-handed alpha
Helix 4
4
A
78 87Right-handed alpha
Helix 5
5
A
93 102Right-handed alpha
Helix 6
6
A
114 129Right-handed alpha
Helix 7
7
A
142 147Right-handed 310
Helix 8
8
A
159 165Right-handed alpha
Helix 9
9
A
183 187Right-handed 310
Helix 10
10
A
189 200Right-handed alpha
Helix 11
11
A
201 203Right-handed 310
Helix 12
12
A
214 218Right-handed 310
Helix 13
13
A
259 261Right-handed 310
Helix 14
14
A
265 282Right-handed alpha
Helix 15
15
A
285 296Right-handed alpha
Helix 16
16
A
322 331Right-handed alpha
Helix 17
17
A
352 359Right-handed 310
Helix 18
18
A
372 378Right-handed alpha
Helix 19
19
A
379 382Right-handed 310
Helix 20
20
A
389 398Right-handed alpha
Helix 21
21
A
399 401Right-handed 310
Helix 22
22
A
421 437Right-handed alpha
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There are 4 sheets in PDB entry 2Y66. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 54first strand
Strand 2
A
32 35parallel
Strand 3
A
8 11parallel
Strand 4
A
67 70parallel
Strand 5
A
90 92parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 137first strand
Strand 2
A
153 157parallel
Strand 3
A
106 110parallel
Strand 4
A
173 176parallel
Strand 5
A
207 211parallel
Strand 6
A
228 230parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 241first strand
Strand 2
A
246 250anti-parallel
Strand 3
A
253 257anti-parallel
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There are 6 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 309first strand
Strand 2
A
312 316anti-parallel
Strand 3
A
406 409parallel
Strand 4
A
339 344parallel
Strand 5
A
364 369parallel
Strand 6
A
384 386parallel
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