Analysis of interatomic Contacts of Structural Units in PDB entry:
2Y7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Y7W entry

There are 4 chains in PDB entry 2Y7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 89GLU 300
B
 PHE 90SER 299
C
 SER 89SER 299
D
 PHE 90GLU 300
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2Y7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
104 123Right-handed alpha
Helix 2
2
A
137 145Right-handed alpha
Helix 3
3
A
187 194Right-handed alpha
Helix 4
4
A
208 216Right-handed alpha
Helix 5
5
A
231 238Right-handed alpha
Helix 6
6
A
247 252Right-handed alpha
Helix 7
7
A
253 258Right-handed alpha
Helix 8
8
A
280 282Right-handed 310
Helix 9
9
A
284 298Right-handed alpha
Helix 10
10
B
104 123Right-handed alpha
Helix 11
11
B
139 144Right-handed alpha
Helix 12
12
B
187 194Right-handed alpha
Helix 13
13
B
208 216Right-handed alpha
Helix 14
14
B
231 238Right-handed alpha
Helix 15
15
B
247 258Right-handed alpha
Helix 16
16
B
280 282Right-handed 310
Helix 17
17
B
284 298Right-handed alpha
Helix 18
18
C
104 123Right-handed alpha
Helix 19
19
C
137 145Right-handed alpha
Helix 20
20
C
187 194Right-handed alpha
Helix 21
21
C
208 216Right-handed alpha
Helix 22
22
C
231 238Right-handed alpha
Helix 23
23
C
247 252Right-handed alpha
Helix 24
24
C
253 258Right-handed alpha
Helix 25
25
C
280 282Right-handed 310
Helix 26
26
C
284 298Right-handed alpha
Helix 27
27
D
104 123Right-handed alpha
Helix 28
28
D
187 194Right-handed alpha
Helix 29
29
D
208 216Right-handed alpha
Helix 30
30
D
231 238Right-handed alpha
Helix 31
31
D
247 252Right-handed alpha
Helix 32
32
D
253 258Right-handed alpha
Helix 33
33
D
280 282Right-handed 310
Helix 34
34
D
284 298Right-handed alpha
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There are 6 sheets in PDB entry 2Y7W. Click on sheet of interest to get list of strands forming it: AA, AB, BA, CA, CB, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 169first strand
Strand 2
A
271 278anti-parallel
Strand 3
A
149 152anti-parallel
Strand 4
A
98 103parallel
Strand 5
A
127 131parallel
Strand 6
B
221 226parallel
Strand 7
B
195 199parallel
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There are 10 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
259 263first strand
Strand 2
A
171 176anti-parallel
Strand 3
A
242 246anti-parallel
Strand 4
A
195 199parallel
Strand 5
A
221 226parallel
Strand 6
B
127 131parallel
Strand 7
B
98 103parallel
Strand 8
B
149 152parallel
Strand 9
B
271 278anti-parallel
Strand 10
B
161 169anti-parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 246first strand
Strand 2
B
171 176anti-parallel
Strand 3
B
259 263anti-parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 169first strand
Strand 2
C
271 278anti-parallel
Strand 3
C
149 152anti-parallel
Strand 4
C
98 103parallel
Strand 5
C
127 131parallel
Strand 6
D
221 226parallel
Strand 7
D
195 199parallel
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There are 10 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
259 263first strand
Strand 2
C
171 176anti-parallel
Strand 3
C
242 246anti-parallel
Strand 4
C
195 199parallel
Strand 5
C
221 226parallel
Strand 6
D
127 131parallel
Strand 7
D
98 103parallel
Strand 8
D
149 152parallel
Strand 9
D
271 278anti-parallel
Strand 10
D
161 169anti-parallel
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There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
243 246first strand
Strand 2
D
171 176anti-parallel
Strand 3
D
259 263anti-parallel
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